Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2082 |
Symbol | |
ID | 4245730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3249986 |
End bp | 3251362 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638107193 |
Product | thymidylate synthase, flavin-dependent |
Protein accession | YP_721796 |
Protein GI | 113475735 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR01443] intein C-terminal splicing region [TIGR01445] intein N-terminal splicing region [TIGR02170] thymidylate synthase, flavin-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.734062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.451472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCAAG CAAGAACTCA TAGAATAGGT TGCTGTTTGT CGGGCAATAC AAAAGTTAGA TTTAGGTATT CGTCTTCATC CCAAGAAGCG AAATATTATG AGGAAACAAT TGAAAAATTA GCTAACTTAT GGCATTACGG GAGCAAAAAT CAATATACTT CTAAAGATGC AAAATGTATG CAAGAAAATA TATCTAGCCG TAATATTTTT ACTCTAGATA CCCAAACTAA CCAAATTGTT TCTAGCAAAA TTACCAACAT ATATATTAAT GGTGAAAAAG AAACTTACAC AATAAAAACT GTTTCTGGTA AGGAAATAAG AGCTACCCTA GAACACCAGT TTTGGACTAA CCAAGGGTGG AAACGATTAA AAGATTTTAA TAACAGCACT CAATTATGTG AAGTGCAATT AGCTGGAAAT AAAGTTACTC CACAAGAAGT TAAATTTCTC GAAAAAGAAA TGTTTAATGA AAAGTGGATC CCAGTAAGAA ATTATGACGG ATATAAAATT TATAGCTTAG ATATTTTGAA TTCTTACCTT ATTCAAAAAG AGAATAAAGA GCATTCACGG AGCAAATCTA AAAATTGTTT ACTTCCCAAT TTAAATTATG GAATTAGGTA TGATCGACTT TCAGAAGTAA ATATAAATAG ATTAGTAATG GAAAACTTGA AATTATTAGG AGAATACAAG GAACTTGAAG TCAGACATTT AAATGAGAAT AGTTTTAACA ACAAGCCAAA AAAATTTGCC TGGAATTCTA GCAAAAGCGA CCAAATTGAC AATATCAATA ACAATAGTTT CTCTGATAAT TCTGGTGTTT TTGTAGAGAT AGAATCTATT GAAAAATTTG GCAAAGAAAT TACTTATGAT CTTGAAGTCG AACACCCAGA ACATAATTTT ATAGCCAATG GTTTAGTTGT TCATAATTCT TTCGATGTAC AAAGTTATCG GTTTTGTTCG GGAAAAGTTA TTGCAGTAGC AGATGGAAAA ACTGATATAG AAACTGCTTT TTACTTACGT CCAGTCGGAG AATATTCTGA CCGCAAAGGT AAAAAATATT ATTATTCCGC CGAACAACGA GAAAAAGATT TATATTGGTG TTTAGAAGCA GCTAAGAAAT ACAAACTTGA TATGGAACTT GGAATGTCTG AAGAACATGC CAGAGGAAAA ATTCCTTTTG ATTATCGTCA GCATTTTGTT GTCAGTTTTA ATTGTCGTAG TTTGCTACAT TTTTTAGATT TACGTTTTAA AAAGAATGCT CAATTAGAAA TTCAAAAACT TTGTGAATTA ATGTGGCCTC ATTTTCAAGA TTGGGTTCCC AATATAGCAG AATGGTATGA AAAAAATAGA CTTAAAAAAG GCAAATTAGC ACCTTAA
|
Protein sequence | MQQARTHRIG CCLSGNTKVR FRYSSSSQEA KYYEETIEKL ANLWHYGSKN QYTSKDAKCM QENISSRNIF TLDTQTNQIV SSKITNIYIN GEKETYTIKT VSGKEIRATL EHQFWTNQGW KRLKDFNNST QLCEVQLAGN KVTPQEVKFL EKEMFNEKWI PVRNYDGYKI YSLDILNSYL IQKENKEHSR SKSKNCLLPN LNYGIRYDRL SEVNINRLVM ENLKLLGEYK ELEVRHLNEN SFNNKPKKFA WNSSKSDQID NINNNSFSDN SGVFVEIESI EKFGKEITYD LEVEHPEHNF IANGLVVHNS FDVQSYRFCS GKVIAVADGK TDIETAFYLR PVGEYSDRKG KKYYYSAEQR EKDLYWCLEA AKKYKLDMEL GMSEEHARGK IPFDYRQHFV VSFNCRSLLH FLDLRFKKNA QLEIQKLCEL MWPHFQDWVP NIAEWYEKNR LKKGKLAP
|
| |