Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2039 |
Symbol | |
ID | 4243643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3179580 |
End bp | 3180479 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107152 |
Product | SSU ribosomal protein S6P modification protein |
Protein accession | YP_721755 |
Protein GI | 113475694 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.014544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG CTATTTTATC TACTGATCCA AGTCTTTATT CTACTAGAAA ATTGCTGGAA GCTGGAGAAC AACGCGGTCA TGAAGTTTAT GTTATTGATT ACTTACGCTG TTATATGAAA ATTACTTCTA TGAAGACTGA AGTTATTTAC ATGGGTAAAT CTTTAAAAGG ATTTGATGCT ATTATTCCTC GCATTGGTGC TTCTAAAACA TTTTATGGTA CGGCAGTAGT TAGACAGTTT GAAATGATGG GAGTTTTTAC AGCAAATCCT TCTCTAGCTA TTTCTCGCTC TCGTGATAAA TTACATTGTT TACAATTATT AGCTCGAGAA GGAATAGAAT TGCCTGTGAC TAGTTTTGCT CATTTTACTA AAGATATTAA TAGTTTAATT AATACTGTTG GTGGCGCTCC TTTGGTGATA AAATTATTAG AAGGATCTCA AGGAATAGGA GTAGTTTTAG CTGAAACTTA TCAAGTGGCT AAGTCAGTTA TTGAAGCTTT TTCTGGTTTG AATGCTAATT TTTTGGTACA GGAATTTATT GAAGAGGCAG GTGGGGCAGA TGTCCGATGT TTTGTAGTAG GAGATAGAGT AATAGCTGCT ATTAAAAGAC AGGGAACTGA GGGAGAATTT CGCTCAAATT TGCATCAAGG TGGTACAGCA AAAAAAATTA AATTGACTCC ACAAGAACGC TCAATTGCTA TGCGTTCAGC TAAGGCAATA GGGCTGAAAG TTGCGGGGGT AGATTTATTA CGTTCTGATC ATGGCCCAGT AGTTATGGAG GTGAATTCTT CTCCTGGTTT AGAAGGAATA GAAACTGCTA CAGGAGTAGA TGTTTCTGGC AAAATAATAG AGTTTTTAGA GAAGAATTTA GGAAAAGGTC CACTGGGCGA TCGCCTTTAA
|
Protein sequence | MKIAILSTDP SLYSTRKLLE AGEQRGHEVY VIDYLRCYMK ITSMKTEVIY MGKSLKGFDA IIPRIGASKT FYGTAVVRQF EMMGVFTANP SLAISRSRDK LHCLQLLARE GIELPVTSFA HFTKDINSLI NTVGGAPLVI KLLEGSQGIG VVLAETYQVA KSVIEAFSGL NANFLVQEFI EEAGGADVRC FVVGDRVIAA IKRQGTEGEF RSNLHQGGTA KKIKLTPQER SIAMRSAKAI GLKVAGVDLL RSDHGPVVME VNSSPGLEGI ETATGVDVSG KIIEFLEKNL GKGPLGDRL
|
| |