Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1882 |
Symbol | rplT |
ID | 4245503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2876141 |
End bp | 2876497 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107003 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_721611 |
Protein GI | 113475550 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0641503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGAG TCAAAAGAGG TAATGTTGCC CGTAAACGCC GAAAGAAAAT ACTGAAATTA GCTAAAGGGT TTAGAGGAGC ACAATCTAGA TTATTTAAAG TTGCTAACCA ACGAGTGATG CAGGCGTTAC GGAATGCCTA TCGCGATCGC CGTAAACGGA AACGGGACTT TCGTCGTTTG TGGATTACCC GCATCAATGC TGCAGCTCGT CAACAAGGTA TGACTTATAG TCAATTAATT TGCAATATGA AAAGAGCAAA TATTGCAATT AACCGTAAAA TGTTAGCACA ATTAGCTGTT TTAAATCCTG AAGCTTTTGC AAAAGTTTTG GAGCTGGCTA GTCTTGCCAA AAAATAA
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Protein sequence | MPRVKRGNVA RKRRKKILKL AKGFRGAQSR LFKVANQRVM QALRNAYRDR RKRKRDFRRL WITRINAAAR QQGMTYSQLI CNMKRANIAI NRKMLAQLAV LNPEAFAKVL ELASLAKK
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