| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1822 |
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| Symbol | |
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| ID | 4244536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 2778826 |
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| End bp | 2781759 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638106944 |
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| Product | NB-ARC |
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| Protein accession | YP_721552 |
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| Protein GI | 113475491 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.244157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.101864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGTT TCTTTTTGGT ATTTGACTGC AAAAATTATC CTCCTCAAGG GGATGTTGTT
TTTGTTCATG GTTTGGCTGG TCATCCTTGG GGTACATGGC ATCCTCAAAA TAAAAAGGAT
AAAGAAGATG TTGACTTTTT GCTGTGTTGG TTGGGTGAAG AACTACAAGC ACATGGAATA
GATGTTAATG TCTGGAGTTT TGGATATGAT GCTCCTGGTT TTCAATATTT TGGTCAGGGA
ATGCCGCGTT TTGATCTGGC TAGTAATTTA CTGGAGTATC TTCAGGTTTA TGATATTGGC
AAGACATCCA CTAGTTTCCC CAAACGCCCA TTGATATTTG TAACTCACAG TTTGGGTGGT
TTGGTGGTGA AGGAGGTAAT TCGTACAGCT CAAAGTTTTC CTGAGTATCT AGCTATTGTT
AAACAGGTTA AAGGAATTGT ATTTTTGTCT ACTCCACACA CGGGAACTCA TTTGGCTAAT
TTAATTGATC ACGTCGGTTT TTTGACTAGA CCTACAGTGA ATGTTGAAGA GTTAAAAGAA
CATTCCCCTC AACTGCGAGA TCTTAATGAA TGGTATCGAC AAAATGTTGG CAAGTTGGAA
ATTAAAACTA AGGTTTTTTA TGAAACAAAG TCTCTGAATG GGGTTTTGGT TGTGAATGAG
GATAGCGCTA ACCCTGGTAT TCACGATGTT AAACCTATTG CTGTTTCAGC AGAAGACCAC
AACTCTATTG CTAAACCTGG AAAAAATGAT TTGGTTTATC TTTCGGTGAG AAAGTTTTGT
CAAGATATTT TTGCTTTAGA GGAAAGCACT TCTTCTCAAT ATCTTCACCA AAAATACTAT
ATTCCTGGGG AGGCTAGCTT AGAGAATAAA GTTTTTGTAG GTAGGGAAAA AGAATTAGCT
GATGTCGACA AGTTACTCAA AAATTATCAG CGGGTTTCTA TTGTTTCTGT TTCTGGAATG
GGTGGTGTTG GTAAAACAGA ACTTTGCCGC CGATATGCTT ATGCTCATAA GTCTGCTTAC
CCTGGAGGTA TTTGTTGGTT GGAAGCGCCG ACAGAAAATG CAGGTATTCA GATACTTAGG
TTTGCTCAGA ATAATTTCCA GCTTGTTTTC TCTTCAGATC AAGATTTACC GGAAAGGTTG
CGCTACTGTT GGCAAAAGTG GTCTGAGGGG AATACTTTGC TGATCTATAA TGATGTAACT
GACTACAATA CTCAGGCCAA GCCTTTTTTA CCTCCGGACT TGTCTCGGTT TCGGGTGTTG
CTGACCACTC GTAAAAGTTT TGGCTCGGCA TTTCCGGAGT TGCGTCTCGA TGTGTTAAAG
CCTTTGGCGG GGATGAAGTT GTTAAGGTCT ATTTTGGGTA GAAAGAGACT TTTGCTAGAA
CCTAGGAAGG CTAGAGAACT GCTGATTTTT TTGGGTTATT TACCTTTGGG AATTGAATTG
GTGGGGCGAT ATTTGGATGA GTATTGGCAG AGTTTGAATA GGGATGGTTT GGCTTTGACA
AAAATGCTTA AGCGTTTAGA AAGAAAGAGT CTGGAACATC AGGCTATGTC ATCTAATGAG
TTAATTAATT ATCCTTATGG TGTGGCGGAG GCGATCGCTT TGAGTTGGGA GATGTTGGAT
GAAAATACTC AGGAAATTGG GTTGAAGTTA GGTTTATATG CTTTGGCACC TATTCGTTTG
TGGTGGGATG GGATAGAAGA TGATGAAGAG TTGGAAGGTT GGGAAATTGC TCTTGGGAAT
TTGGAAAATC TGCATTTACT GAAGAGTGTT GAGCCTGGTG TTTATATTTT GCATTCTCTA
GTGCGAGAGT TTTTGCAGAT GAAGTTGAAA GAATATCCAA GGGCAGATGA GTTAAAGCGG
GGTATTTGTC AGGTAGTGGC AGAGGCGGCT AGGAATATTC CTGATAACAT TACAGTGGAG
CAAGTTAAGG AAGTTGAGGT TGATATTCCT CATATTACGG AAGTGGCGGC AGTTTTGACT
GAGTATTTGA GTGATGATGA TTTGATTTCT CCTTTTAATG GACTAGGTCG GTTCTATCTA
GGTCAAGCAT TGTACTCACA GGCACAACTT TGGTTAGAGA CAGGTAAAGA AATAGCAGAA
AAACGGCTAG ACAAAGATAA TGCTGACATT GGGAATATCT ACAACAGTCT GGCTTTATTA
TATAAGTCTC AAGGAAAATA CGAAGCTGCA GAACCTTTGT ACCTACAAGC TATTGAAACC
GCAAAAATAG CCCTCCCTGA AAATCATCCA TCTATTGCCA CAGGCCTCAA CAACCTGGCA
AATTTATATT ATTCTCAAGG AAAATACGAA GCAGCAGAAC CATTGTACCT ACAAGCTCTT
GAAATCAAAA AAATAGCCCT CCCTGAAAAT CATCCACAAC GTGCCAGCGG CCTCAACAAC
CTGGCAGGTT TATATTATTC TCAAGGAAAA TACGAAGCAG CAGAACCATT GTACCTACAA
GCTCTTGAAA TCGACAAAAT AGCCCTCCCT GAAAATCATC CACAGTTTGC CACTCACCTC
AACAACCTGG CAAAATTATA TAGATCTCAA GGAAAATACG AAGCTGCAGA ACCATTGTAC
CTACAAGCTC TTGAAATCGA CAAAATAGCC CTCCCTGAAA ATCATCCACA GTTTGCCACT
CACCTCAACA ACCTGGCAAA ATTATATAGA TCTCAAGGAA AATACGAAGC TGCAGAACCA
TTGTACCTAC AAGCTCTTGA AATCAACAAA ATAGCCCTCC CTGAAAATCA TCCAGATATT
GCCACTGACC TCAACAACCT GGCTTTATTA TATGAGTCTC AGGGAAAATA CGAAGCTGCA
GAACCTTTGT ACCTACAAGC ACTGAAGATA TTAAAACAAT CATTAGGAGA AGAACATCCT
AATACTCAAA CAGTTCAGAA AAACTATCAA AATTTCTTAA ATGAGAAAAA ATGA
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| Protein sequence | MLGFFLVFDC KNYPPQGDVV FVHGLAGHPW GTWHPQNKKD KEDVDFLLCW LGEELQAHGI
DVNVWSFGYD APGFQYFGQG MPRFDLASNL LEYLQVYDIG KTSTSFPKRP LIFVTHSLGG
LVVKEVIRTA QSFPEYLAIV KQVKGIVFLS TPHTGTHLAN LIDHVGFLTR PTVNVEELKE
HSPQLRDLNE WYRQNVGKLE IKTKVFYETK SLNGVLVVNE DSANPGIHDV KPIAVSAEDH
NSIAKPGKND LVYLSVRKFC QDIFALEEST SSQYLHQKYY IPGEASLENK VFVGREKELA
DVDKLLKNYQ RVSIVSVSGM GGVGKTELCR RYAYAHKSAY PGGICWLEAP TENAGIQILR
FAQNNFQLVF SSDQDLPERL RYCWQKWSEG NTLLIYNDVT DYNTQAKPFL PPDLSRFRVL
LTTRKSFGSA FPELRLDVLK PLAGMKLLRS ILGRKRLLLE PRKARELLIF LGYLPLGIEL
VGRYLDEYWQ SLNRDGLALT KMLKRLERKS LEHQAMSSNE LINYPYGVAE AIALSWEMLD
ENTQEIGLKL GLYALAPIRL WWDGIEDDEE LEGWEIALGN LENLHLLKSV EPGVYILHSL
VREFLQMKLK EYPRADELKR GICQVVAEAA RNIPDNITVE QVKEVEVDIP HITEVAAVLT
EYLSDDDLIS PFNGLGRFYL GQALYSQAQL WLETGKEIAE KRLDKDNADI GNIYNSLALL
YKSQGKYEAA EPLYLQAIET AKIALPENHP SIATGLNNLA NLYYSQGKYE AAEPLYLQAL
EIKKIALPEN HPQRASGLNN LAGLYYSQGK YEAAEPLYLQ ALEIDKIALP ENHPQFATHL
NNLAKLYRSQ GKYEAAEPLY LQALEIDKIA LPENHPQFAT HLNNLAKLYR SQGKYEAAEP
LYLQALEINK IALPENHPDI ATDLNNLALL YESQGKYEAA EPLYLQALKI LKQSLGEEHP
NTQTVQKNYQ NFLNEKK
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