Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1817 |
Symbol | |
ID | 4244531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2773777 |
End bp | 2774766 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638106939 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_721547 |
Protein GI | 113475486 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.442816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00257504 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAAATA TAGGCGTTTC TATAATTGGA AGTGGTTCTG CAATACCAAA AACATCTCTA GATAATCAAC AATTATCCCA AATAGTAGAG ACTTCTGACG AATGGATCAT TTCTCGCACT GGAATTAATA AGCGACAGCT AGTAGATACA ACAGAATCAT TATGTAGCCT TGCTACTCAA GCATCTCTAG CAGCTCTTAA CCAAGCAAAT ATTACTCCTA AAGATATTGA CCTAATTATT CTGGCTACAT CTACTCCTGA TGACTTATTT GGTACTGCAT GTAAAATTCA ATGGGAGTTG GGCGCACAGA AAGCAGTTGC TTTTGACATA ACTGTGGCTT GTTCTGGTTT TCTCTTTGCT CTGGTTACAG GAGCGCAATT TATTCGTAAT GGAGTTTATC AAAATGTTTT GTTAATTGGG GCAGATATTC TCTCGCGTTG GGTAGACTGG GAAGACCGAC GGACTTGTGT TTTATTTGGA GATGGGGCAG GGGCAGTACT TTTACAAGCT TCAGAAAGCG ATCGCCTGCT GGGTTTTGAA CTTGGTAGTG ATGGTAGTCA AAATAGCTGT TTAAGTCTTT CTTACCAACC CCAAGAAAAG AGAATAATTG AGGGAGTAAC TGTTAGTCAA GGTACTTATC AACCAATAGC TATGAATGGT AAAGAAGTCT ATCGTTTTGT AGTACAAAAA GTACCGGAAG CTATAGAAAA AGCTTTATTA AAAGCTAATA TTGATATTGA TAAACTTGAC TGGTTGCTAT TACACCAAGC TAACCAAAGA ATCCTTGATG CTGTTGCTAA TAGATTGAAT ATTCCACCAG AAAAAGTTAT TAGTAATCTA CGAAATTATG GCAATACTTC TGCTGCTTCT ATACCGCTAG CTTTAGATGA AGTTGTTAGG GAAGGACTTG TTAAATCAGG AGACATTATT GCTGCTTCTG GCTTTGGGGC TGGATTAAGT TGGGGTGCAG TAATTTTTCA ATGGAACTGA
|
Protein sequence | MTNIGVSIIG SGSAIPKTSL DNQQLSQIVE TSDEWIISRT GINKRQLVDT TESLCSLATQ ASLAALNQAN ITPKDIDLII LATSTPDDLF GTACKIQWEL GAQKAVAFDI TVACSGFLFA LVTGAQFIRN GVYQNVLLIG ADILSRWVDW EDRRTCVLFG DGAGAVLLQA SESDRLLGFE LGSDGSQNSC LSLSYQPQEK RIIEGVTVSQ GTYQPIAMNG KEVYRFVVQK VPEAIEKALL KANIDIDKLD WLLLHQANQR ILDAVANRLN IPPEKVISNL RNYGNTSAAS IPLALDEVVR EGLVKSGDII AASGFGAGLS WGAVIFQWN
|
| |