| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1784 |
|---|
| Symbol | |
|---|
| ID | 4242249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 2724804 |
|---|
| End bp | 2725916 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638106908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_721516 |
|---|
| Protein GI | 113475455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00387398 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT ACAAATACAG ACCAAATCCT TATATTTTTG GCAAACCAAT TTATCAAAAA
AAACAATTAT TTGGTAGAGA AAATACTGTT AAAAGAATTC AAAATAACAT TAAAAATAAT
ATAAAAATAA CTTTGTTGCA TATCCAAAGA CGTATTGGTA AAACTTCATT AATAACTTGT
TTGCCTCAGT TTTTCACTGA TGATATTAAG TGTGTTACTT TTTCATTTCA AGGTTATAAA
AATAGATCAA TACTTGAAAT CTTAAATAAT CTTGCTGATG AGATTGCTAA TACTATTGAT
GGAGTCCCTA GAGAAGTAAG AGAACTAGCT GATAGTTCAG AAAATTTTTT TCGGATTTTT
TTGCCAAGGA TTATTAATAA ATACTTATCT GGTAAAAACC TTGTTCTTCT CCTAGATGAA
TTTGATGTTT TAGAAGAAGA TCAAACAACG TTTATTCATG GAAAATACTT ATTTAATGAA
TTAAAAAAAG CTGTGAACCG AGAAGAAAAA CTATTTGCTA TCCTGGTTTT TGGTAGACCA
TTAAAAGATA TGACCTATCT AGGAGAATTG TTACAAAAAG AAGGTCAAGA GACTATAGAA
GTTGGTTTGC TGGATAAGAA AAGTACACAC AATTTGATTG TTGAGCCAGC TAAGGGAACA
TTAGAATATG AAGCAGATGC AATTGATGCT ATTTGGCAAC TATCCGCGGG TCATCCTTCT
CTAACACAAC TACTATGCTT GTATATTTTT AGGTTTTGTA TTCAAAAAGG AATAAAAAAG
GTAACTCATA CTCATGTCGA CTCAATTTTA GATGAAGCAA TGGAGGGAGG TAAGGCAGCA
TTAAAAGGCT TTATAGAACC TTTGAATGAA AACGAAAATT TGTTTTTTCG TGCAGTAGCA
AAAGCTCAGA ATGAAGTTGG AGAAAACCGA CTAAAGGCTA ATATAAAAAA ATCGCAGTCT
GTAGGGAAAC GTTTAGCTGA AGAATATGGC TTTTTAGAAG AAAAAGAAGA TGGAACAGGC
TATAAAATTA AAGTCGAGTT AGTCCGGCGT TGGCTAGTAA AAAATTATCC TTTATCTGAC
AAAGAAAAGC TGCAAGTGGA AAAAGCTATT TAA
|
|---|
| Protein sequence | MNDYKYRPNP YIFGKPIYQK KQLFGRENTV KRIQNNIKNN IKITLLHIQR RIGKTSLITC
LPQFFTDDIK CVTFSFQGYK NRSILEILNN LADEIANTID GVPREVRELA DSSENFFRIF
LPRIINKYLS GKNLVLLLDE FDVLEEDQTT FIHGKYLFNE LKKAVNREEK LFAILVFGRP
LKDMTYLGEL LQKEGQETIE VGLLDKKSTH NLIVEPAKGT LEYEADAIDA IWQLSAGHPS
LTQLLCLYIF RFCIQKGIKK VTHTHVDSIL DEAMEGGKAA LKGFIEPLNE NENLFFRAVA
KAQNEVGENR LKANIKKSQS VGKRLAEEYG FLEEKEDGTG YKIKVELVRR WLVKNYPLSD
KEKLQVEKAI
|
|---|
| |