Gene Tery_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1773 
Symbol 
ID4242238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2702305 
End bp2704974 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content45% 
IMG OID638106898 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_721506 
Protein GI113475445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAT TTTCTCCAGA TGACCACTCT TTATTTCCCC AGGAACCAGA TGAGACATCC 
CTAAATGTCC ACTATCTCCC TGGGGCTGAC TCGAACCCTG AAGTTACAGA CCCGATGATA
CAAGGTGCCT GGGGTGAGGT TCGTGACGAA TTGGCTGATT TTATCTTGGC TCCTGAGTTC
GATGACTATA TTAAGACGGC TTTTGGTGAA ACTGTGGACC CGGAGCTGGC AAAAGAGCAA
ATAAAGGATG TTTTGACTGG GGAAAATTTG CCGGAGGTTA TTATGTTGCC CGCGGCAGAT
ATGGAGCCGG CGGTGGGTGC CTATGATCCT TTGACTGATT CAATTTATTT GGCTGATTCT
TTATTGCCTG ATACTGATGG GGCAGAATAT GGGGTTTTGG TGGATGTGCT GTTGGAGGAG
TTGGGGCATT TTTTGGACTC TCAGTTGTCT GACTCGGACT CCCCTGGAGA TGAGGGTGAG
TTATTGGCTG GTTTGGTGAG GGGTGAGGAG TTGACTCAGT TTCAGGTGAT GATGCTTCGG
GGTCAGGATG ATCGGGTAGA TATTTGGGTC GGGGGTGTTG AGGTTGAGGT TGAGGCTAGT
GAAAAGGTTG ATTTTGAGAA GGTTGATGAT TTTTTGGTGG GAGATGAGCC TCGGTCATTA
GTAGTAGGAG ACTTTAATAG AGATGGCATT CCTGATCTGG CTGTGGCGAA CAGGGCTGAT
GACGACGTAT CAGTGTTATC AGGAAATGGT GACGGTAGTT TTGGTTCAGC TACTAATTTT
TTTGTGGGAG ATAGACCAGA GTCACTAGCA GCAGGAGATT TTAATGGAGA TGGTATTCCT
GATCTGGCTG TGGCAAATGC TGGTTCAGAC AACGTATCAG TTTTATCAGG AAAAGATGAC
GGTAGTTTTG CTCGACGTAC TAATTTTCCG GTGGGAGACG AACCAAGATC AGTAGCAGTA
GGAGATTTTG ATAGAAATGG CATTCCTGAT CTGGCTGTGG CGAACAGAGA CTCAAACAAT
GTATCAGTGT TATTAGGAAA TGGTGAGGGT AGTTTTGGTT CAGCTACTAA TTTTCTGGTG
GGAGACGAAC CAATATCAGT AGCAGTAGAA GATTTTAATG GAGATGGCAT TCCTGATCTG
GCTGCGGCGA ACTTCTTTTC AGACAATGTA TCAGTGTTAT CAGGAAAAGG TGACGGTAGT
TTTGGTCCAG CTATTAATTT TCCGGTGGGA GAGACACCTA CCTCAGTAGT AGCAAGAGAT
TTTAATGCAG ATGGCATTCC TGATCTGGCT GTGGCGAACA GAGACTCAAA CAATGTATCA
GTGTTATCGG GAAAAGGCGA CGGTAGTTTT GGTTCAGCTA CTAATTTTCC GTTGGGAGGC
GGACCTTTTT CAGTAGCAGT AGAAGATTTT AATGGAGACG GCACTCCTGA TCTGGCTGTG
ACGAACTTCT TTTCAGACAA GGTATCAGTG TCATTAGGAA AAGGTGACGG TAGTTTTGGT
TCAGCTACTA ATTTTCCGGT GGGAGACAGA CCTTTCTCAT TAGCAACAGA AGATTTTAAT
GGAGACGGCA TTCTTGATAT GGCTGTGGCG AACTGGTTGG ATGGCAACGT ATCCATCCTG
ATCAACAAAA ACCCTATAAC CATCATTCCC AACATCACTA TCTCGGACAC CAAGATCACC
GAAGGCAACA TAGATAAAAC CGCTAAATTC ACGGTCACTC TAGACAACCC CACAAACGCC
ATAGTCAAAG TCAACTACAC CACAGCCAGC CAAACCGCAA AAGTCAACCA AGACTACAAA
ATTACTACAG GCACTCTGAC CTTTCGACCA GGAGAAACGA ACAAAAACAT AACAGTTCCC
ATCTTGGGAG ATAAGCGAGA CGAACCCAAG GAAAAATTCG GGCTAAAACT GAGGAGCCCC
CAGAATGCGA ATATCAAAGA TGGGGAGGCT ACGGGCACTA TCGTTGATAA CGACCCACTT
CCCCAAATAT CTATCGGCGA TGCCAAAGTT ACGGAAGGAA ACCGAGGTCA GAAAAACATG
GAATTTGAAG TGAAATTAAA CAACCCCAGC GGGAAAACAG TGAGAGTAAA TTATGGAACC
CAAGAGGGCA GCGCCAAGTC AGGAAAAGAT TTTCGAAATC AAAGGGGAGT CCTGACATTC
AAGCCAGGGC AGACGGAAAA GATAGTGAAT ATTCCCATTT TGGGAGATAG GGTTGATGAA
AATAACGAGG AGTTTCAAGT CAAACTCAGC CGTGCCAGAA ATGGAAAATT GTCAGATAAA
ACAGCGGTCG GCAGAATTAT TGATAATGAC GACCCACTTC CCCAAATATC TATCAGGGAC
GCTAAAGTGA CGGAAGGAAA CAGGGGTAAG AAACAGATGA AGTTTGAAGT TGAGCTCAAC
AGCCTGAGCA CGAAAACAGT GAGGGTAAAT TACGCTACAG TAGATGGCAG CGCGAAGTCA
GGAAAAGATT TTCAAAATAA AAGGGGAGTG GTGACATTCC AACCAGGGCA GAGGAAAAAG
ATAGTGAATA TTCCTATTTT GGGAGATAGG GTTGATGAAA ATAATGAGCA GTTTCAAGTC
AAACTCAGCC GTGCCAGAAA TGGTAGGTTG TCGGATAACA ACGCGATCGG CAGAATTATT
GATAACGACG AAGGGGTTCC CAAAGATTAG
 
Protein sequence
MDEFSPDDHS LFPQEPDETS LNVHYLPGAD SNPEVTDPMI QGAWGEVRDE LADFILAPEF 
DDYIKTAFGE TVDPELAKEQ IKDVLTGENL PEVIMLPAAD MEPAVGAYDP LTDSIYLADS
LLPDTDGAEY GVLVDVLLEE LGHFLDSQLS DSDSPGDEGE LLAGLVRGEE LTQFQVMMLR
GQDDRVDIWV GGVEVEVEAS EKVDFEKVDD FLVGDEPRSL VVGDFNRDGI PDLAVANRAD
DDVSVLSGNG DGSFGSATNF FVGDRPESLA AGDFNGDGIP DLAVANAGSD NVSVLSGKDD
GSFARRTNFP VGDEPRSVAV GDFDRNGIPD LAVANRDSNN VSVLLGNGEG SFGSATNFLV
GDEPISVAVE DFNGDGIPDL AAANFFSDNV SVLSGKGDGS FGPAINFPVG ETPTSVVARD
FNADGIPDLA VANRDSNNVS VLSGKGDGSF GSATNFPLGG GPFSVAVEDF NGDGTPDLAV
TNFFSDKVSV SLGKGDGSFG SATNFPVGDR PFSLATEDFN GDGILDMAVA NWLDGNVSIL
INKNPITIIP NITISDTKIT EGNIDKTAKF TVTLDNPTNA IVKVNYTTAS QTAKVNQDYK
ITTGTLTFRP GETNKNITVP ILGDKRDEPK EKFGLKLRSP QNANIKDGEA TGTIVDNDPL
PQISIGDAKV TEGNRGQKNM EFEVKLNNPS GKTVRVNYGT QEGSAKSGKD FRNQRGVLTF
KPGQTEKIVN IPILGDRVDE NNEEFQVKLS RARNGKLSDK TAVGRIIDND DPLPQISIRD
AKVTEGNRGK KQMKFEVELN SLSTKTVRVN YATVDGSAKS GKDFQNKRGV VTFQPGQRKK
IVNIPILGDR VDENNEQFQV KLSRARNGRL SDNNAIGRII DNDEGVPKD