Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1621 |
Symbol | |
ID | 4242405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2475534 |
End bp | 2476157 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106763 |
Product | 3'-5' exonuclease |
Protein accession | YP_721373 |
Protein GI | 113475312 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.169628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATT TTCAAGTATG CGATCGCGAT TTAACCAAGG ACATATTATC TAATTATTTG CAAGCTGATA GTATGGCAGT AGATACAGAA ACAATGGGGT TATTACCAAG GCGCGATCGC TTATGTTTAG TCCAGTTATG TGACCCTCTT GGCCAAGTTA CAGCAATTCG TATTCATAAG GGGCAACAAG AAGCACCAAA TTTAAAACAA TTAATGGAGG CAAATAGCAT AGTTAAAGTA TTTCATTTTG CTAGATTTGA TGTAGCAATG TTGCAACATT ATTTAGGTAT TAAAGTTTCC CCAATTTTCT GTACCAAAAT TTCCAGTAAA TTAGCACGAA CTTATACAGG TAAACATGGT TTAAAAGATT TAGTAATGGA GTTAGAAAAA GTAGAGTTAG ATAAATCTTC CCAAAGTTCT GACTGGGGAA ATGCAGAGAA TTTAACAGAA AAACAATTGA ATTATGCTGC TAACGATGTG CGATATTTAT TGAGCGTCAG GGAGAAGTTA AGTAAAATAT TGAAACGTGA AGAAAGGTGG GAGTTAGCAC AGCAATGTTT TGAATGTTTA CCCGTATTTG TAGGATTAGA TTTGTTGCAA TATAAGGATA TTTTTGAGCA TTAA
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Protein sequence | MSDFQVCDRD LTKDILSNYL QADSMAVDTE TMGLLPRRDR LCLVQLCDPL GQVTAIRIHK GQQEAPNLKQ LMEANSIVKV FHFARFDVAM LQHYLGIKVS PIFCTKISSK LARTYTGKHG LKDLVMELEK VELDKSSQSS DWGNAENLTE KQLNYAANDV RYLLSVREKL SKILKREERW ELAQQCFECL PVFVGLDLLQ YKDIFEH
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