Gene Tery_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1582 
Symbol 
ID4242731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2419308 
End bp2419811 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content42% 
IMG OID638106725 
ProductHNH endonuclease 
Protein accessionYP_721335 
Protein GI113475274 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.485926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGG CCAATGTTTT AGTGTTGAAC GCTTCTTATG AACCGCTCAA TATCACGAGT 
TGGCGACGAG CGATCGTCTT GTTGCTCAAA GGTAAAGCGG AGCAAATTGA ACATAAGGGA
ATATATCTTC TCCCAGATAT TCCCTTACCT ACAGTCATCC GACTGCGCTA TTATATCCGA
GTTCCGTACA AAGATATTCC TTTGACGCGT CGAAATGTTT TCCACCGAGA TGGTCATTCT
TGTCAATACT GTGGTTATAT GGGTGATGAT TTAACTTTAG ATCACGTAAT ACCGCGATCG
CGTGGTGGTG GTGATACTTG GGAAAACCTC GTAACGGCTT GTGTCCGTTG CAATGTACAA
AAAGGAAGTC GGACCCCAAA AGAAGCTAAT ATGATTTTGG ACTGCCCTCC TCGAAAACCT
CGCAGTGGTC TTTACTTTGA ATTAACTAAA CATGTTAAAA GTGGTATGAA TAAAGAATGG
CAAAAATATG TTATCGGACT GTAA
 
Protein sequence
MSMANVLVLN ASYEPLNITS WRRAIVLLLK GKAEQIEHKG IYLLPDIPLP TVIRLRYYIR 
VPYKDIPLTR RNVFHRDGHS CQYCGYMGDD LTLDHVIPRS RGGGDTWENL VTACVRCNVQ
KGSRTPKEAN MILDCPPRKP RSGLYFELTK HVKSGMNKEW QKYVIGL