Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1514 |
Symbol | |
ID | 4242974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2300636 |
End bp | 2301247 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638106662 |
Product | ATP-dependent Clp protease proteolytic subunit ClpP |
Protein accession | YP_721272 |
Protein GI | 113475211 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.328594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0626056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCAA CCGTTATTGA ACAATCTGGC CGTGGCGAAA GAGCCTTCGA TATTTACTCT CGACTATTAC GCGATCGCAT AATCTATCTA GGAGAAGCGA TAGACTCTGA ATTGGCCAAC CTAATCGTAG GCCAATTATT ATATTTAGAC TCAGAAGACC CAGAAAAAGA TATTTATCTC TATATAAACT CTCCTGGCGG TTCTGTTAGT GCCGGGATGG GTATTTATGA CACCATGAGA CACGTTCGAC CTGATGTCTG TACTATTTGT ATGGGAATAG CTGCTAGTAT GGGAGCATTT CTTCTGAGTG GAGGAACAAA AGGCAAAAGA ATGAGTCTAC CCCACTCCCG AATTATGATT CATCAACCAT TAGGTGGTGC CCAAGGTCAA GCCACAGATA TTGAAATCCA AGCAAAAGAG ATTTTATACC TCAAAAAATA TCTTAATGAA TGTTTAGCAG AACACACAGG CCAATCTATA GAAAAAATTA CCGAAGATAC AGAAAGAGAC TTTTTTATGT CAGCCACAGA AGCAATGGAA TACGGAATAA TAGACCAAGT TTATAACCGT AATCCCTCTA ATTCTCAACC TATATCTCCT ATTAAGGAAT AA
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Protein sequence | MIPTVIEQSG RGERAFDIYS RLLRDRIIYL GEAIDSELAN LIVGQLLYLD SEDPEKDIYL YINSPGGSVS AGMGIYDTMR HVRPDVCTIC MGIAASMGAF LLSGGTKGKR MSLPHSRIMI HQPLGGAQGQ ATDIEIQAKE ILYLKKYLNE CLAEHTGQSI EKITEDTERD FFMSATEAME YGIIDQVYNR NPSNSQPISP IKE
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