Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1227 |
Symbol | |
ID | 4241801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1900636 |
End bp | 1901181 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638106440 |
Product | hypothetical protein |
Protein accession | YP_721051 |
Protein GI | 113474990 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.453712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGCC CTTTAAGACA AACTATTCTG CTTGTAGATG GCTATAATGT CATTGGTTTA TGGTCTCGTC TCCGAGAAAT TTGCAATTTT CATGGCTTAG AAACAGCCAG AAGAGATTTG ATTGAGGCTT TGGTAAATTA CAGTGCTAGT CAGGACTTAA ATACTCAGAT AGTATTTGAT TCTCAATATC AATATACTCC TACTACAAAA GAAATTATTA CTGATAAGTT ATCGGTTCAT TATACAGAAT TTGGTCAAAC AGCAGACACA TATATAGAGA AAGCTTGTGC TAGTCTTCGT ACTGAAGTCC ATTTGTCTAG AAGTAGGTTA ATTGTAGCTA CTTCAGATAG AGTGCAAAGG CTTACTGTGA TTGGTTATGG TGCCGAATGG ATGTCTTCCC AACAGCTGGC CCATGATGTT GAAAGTGCAG CGAATTGTGT TCGGAGTAGA TGTCAACGAA ATAAAAGGGC ATCAGGTCGT TTTCTGGCTA GTTACTTAGA TCCAGAATCT CAAAAGCGTT TAGCTGAATT GAGAATGGAA AAATGA
|
Protein sequence | MSRPLRQTIL LVDGYNVIGL WSRLREICNF HGLETARRDL IEALVNYSAS QDLNTQIVFD SQYQYTPTTK EIITDKLSVH YTEFGQTADT YIEKACASLR TEVHLSRSRL IVATSDRVQR LTVIGYGAEW MSSQQLAHDV ESAANCVRSR CQRNKRASGR FLASYLDPES QKRLAELRME K
|
| |