Gene Tery_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1227 
Symbol 
ID4241801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1900636 
End bp1901181 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content38% 
IMG OID638106440 
Producthypothetical protein 
Protein accessionYP_721051 
Protein GI113474990 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.453712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC CTTTAAGACA AACTATTCTG CTTGTAGATG GCTATAATGT CATTGGTTTA 
TGGTCTCGTC TCCGAGAAAT TTGCAATTTT CATGGCTTAG AAACAGCCAG AAGAGATTTG
ATTGAGGCTT TGGTAAATTA CAGTGCTAGT CAGGACTTAA ATACTCAGAT AGTATTTGAT
TCTCAATATC AATATACTCC TACTACAAAA GAAATTATTA CTGATAAGTT ATCGGTTCAT
TATACAGAAT TTGGTCAAAC AGCAGACACA TATATAGAGA AAGCTTGTGC TAGTCTTCGT
ACTGAAGTCC ATTTGTCTAG AAGTAGGTTA ATTGTAGCTA CTTCAGATAG AGTGCAAAGG
CTTACTGTGA TTGGTTATGG TGCCGAATGG ATGTCTTCCC AACAGCTGGC CCATGATGTT
GAAAGTGCAG CGAATTGTGT TCGGAGTAGA TGTCAACGAA ATAAAAGGGC ATCAGGTCGT
TTTCTGGCTA GTTACTTAGA TCCAGAATCT CAAAAGCGTT TAGCTGAATT GAGAATGGAA
AAATGA
 
Protein sequence
MSRPLRQTIL LVDGYNVIGL WSRLREICNF HGLETARRDL IEALVNYSAS QDLNTQIVFD 
SQYQYTPTTK EIITDKLSVH YTEFGQTADT YIEKACASLR TEVHLSRSRL IVATSDRVQR
LTVIGYGAEW MSSQQLAHDV ESAANCVRSR CQRNKRASGR FLASYLDPES QKRLAELRME
K