Gene Tery_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1135 
Symbol 
ID4244405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1790156 
End bp1791298 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID638106358 
Productglycosyl transferase, group 1 
Protein accessionYP_720970 
Protein GI113474909 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.683403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00885425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATAAAC AAGTTGAGAA AAAAAAAAGA AATATATTTG TTTTTTTGGA AATTTTTTCT 
TCTGAAGGTG GCATTCAATC TTATGTAAGA GATATTTTTC AAGCTTACAT AGACTTAAAA
AATAATGTAA AACCTAATGA CACCTTTCAA GAATCAGATA TTTTCTTACT AAGGGATGGT
CAATATTGTG AAAATCCCTA TCAGTCGAAG ACCCTAAATT TCTATTATTT TAAAACTAAG
TTTGTTTGGT TAGGAAGATT AAAGTTAGCT ACAACATTAC TATGGTTTTT AATTAAAAAA
CAACCATTAC AAGTTTTTTG TGGTCATATT AATTTGGCTC CATTGGTTAA AGCTTTGTGT
GTACCTCTGG GTATTCCCTA TACAGTTTTA ACTTATGGTA AGGAAGTATG GGAGCCACTA
CCAGATAAAT ATCAACAGGC ATTAAAACAA GCTACTAAAA TTCTAACTAT TAGTCGTTAC
AGTCGCGATC GCTGTTGTGA AAGTAACCAT CTCAATCCGG AAAAGTTTCA TTTGTTGCCT
TGTATGGTGG ATGGAGATAA GTTTATTCCT GGACCATCAC CGGTAGATTT GATTAAGGCT
TACAATCTTC AGGGAGCAAA GGTATTAATG ACTGTAGCTA GACTTTGGTC GGGAGACCCC
TATAAAGGCG TTGATGTTAC CATTAAATCT CTGCCAATTA TACTGCAATT TTTTCCAGAA
GTCAAGTATT TAGTAATTGG ACGGGGAGAT GACCAACCTC GCTTGGCTAA GTTAGCTCAA
GATTTAGGAA TAGGTGAAAA AGTGGTATTT GCAGGTTTTG TGCCCACAGA GAATTTGGTT
AAACATTATC AGGTAGCTGA TGCTTATGTG ATGCCTTCTT TTGAAGGCTT TGGTATTGTT
TATTTAGAGG CAATGGCCTG TGGAGTGCCT GTTTTGTCTG GAGATGCTGA TGGTTCGGCG
GAACCTTTAC AAGATGGAAG GTTAGGATGG CGGGTACCTC ACCGAAGTCC AGAAGCAGTA
GCTAATGCTT GTATAGAGAT GCTGAAGGGA GAGGATAAAA GGTCTGATGG TCAATGGTTG
CGAGAGGAAA GTTTAAAGGT TTTTGGTAGG GTAGCTTTTA CTGAGAGAGT AAGACAACTA
TGA
 
Protein sequence
MNKQVEKKKR NIFVFLEIFS SEGGIQSYVR DIFQAYIDLK NNVKPNDTFQ ESDIFLLRDG 
QYCENPYQSK TLNFYYFKTK FVWLGRLKLA TTLLWFLIKK QPLQVFCGHI NLAPLVKALC
VPLGIPYTVL TYGKEVWEPL PDKYQQALKQ ATKILTISRY SRDRCCESNH LNPEKFHLLP
CMVDGDKFIP GPSPVDLIKA YNLQGAKVLM TVARLWSGDP YKGVDVTIKS LPIILQFFPE
VKYLVIGRGD DQPRLAKLAQ DLGIGEKVVF AGFVPTENLV KHYQVADAYV MPSFEGFGIV
YLEAMACGVP VLSGDADGSA EPLQDGRLGW RVPHRSPEAV ANACIEMLKG EDKRSDGQWL
REESLKVFGR VAFTERVRQL