| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1102 |
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| Symbol | |
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| ID | 4242183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1731395 |
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| End bp | 1735918 |
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| Gene Length | 4524 bp |
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| Protein Length | 1507 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638106328 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_720940 |
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| Protein GI | 113474879 |
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| COG category | [N] Cell motility
[S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG AACAATTTCA AGAACAACTT AAAGCTCGCC TAGATTTAAT AGACCAACTA
TTAACTTGCT CTAGTGGGGA AGAGCAAGCA ATTTTGCACG CCAATTCTCA ATTATTAGAT
GCAGCCTTTG TCAAAACGAT GGAGTTAGTG GCGGCTAAAA TGGTAGAAGA TGGGGAGAAA
AATGCAAAAT GGTTGCAAGG CTTGGCTAAC GAATTGGCAG AAATGATGGA GGCAAAAGAA
AAGCTAGATG TTCAAGTAAT GGAACTCTAC AATGCCGGTA AATATGATGA AGCAATACCT
ATTGCCGAAC AAGGGGTGAC GTTAGCGCGA CAACTCTGGG GAGAAAGTCA TGCCGAAGTT
GCAACCAACC TCAACAACCT AACTTTATTA TATGAATCTC AAGGGAGACA CTCGGAAGCG
GAACCATTGT ACAAACAAGC CATAGAAATC CACAAAGTCG CCCTGCCGGC GAATCATCCA
TCCCTGGCAA CCAACCTCAA CAACCTAGCA AATTTATATC GTGCTCAAGG GAGATACTCG
GAAGCAGAAC CATTGTACAA ACAAGCCATA GAAATCTTCA AAATCGCCCT GCCGGCGAAT
CATCCATCCC TGGCAACCAA CCTCAACAAC CTAGCAGGTT TATATGAATC TCAAGGGAGA
TACTCGGAAG CGGAACCATT GTACAAACAA GCCATAGAAA TCTTCAAAAT CGCCCTGCCG
GCGAATCATC CATCCCTGGC AACCAACCTC AACAACCTAG CAAATTTATA TCGTGCTCAA
GGGAGATACT CGGAAGCGGA ACCATTGTAC AAACAAGCAA TAGAAATCGA CAATATCGCC
CTGCCTGCGA ATCATCCATC CCTGGCTAGA GACCTCAACA ACCTAGCAGA ATTATATCGT
GCTCAAGGGA GATACTCGGA AGCGGAACCA TTGTACAAAC AAGCCATAGA AATCCACAAA
GTCGCCCTGC CGGCGAATCA TCCATCCCTG GCAACCAACC TCAACAACCT AGCAAATTTA
TATCGTGCTC AAGGGAGATA CTCGGAAGCG GAACCATTGT ACAAACAAGC CATAGAAATC
TTCAAAATCG CCCTGCCGGC GAATCATCCA TCCCTGGCAA CCAACCTCAA CAACCTAGCA
GGTTTATATG AATCTCAAGG GAGATACTCG GAAGCGGAAC CATTGTTCAA AAAAGCCATA
GAAATCGACA ATATCGCCCT GCCTGCCAAT CATCCATCCC TGGCAACCGA CCTCAACAAC
CTAGCAGGTT TATATTCTTC TCAAGGGAGA TACTCGGAAG CGGAACCATT GTACAAACAA
GCAATAGAAA TCGACAAGAT CGCCCTGCCG GCCAATCATC CAGACCTGGC AACCCACCTC
AACAACCTAG CAGGTTTATA TAAATCTCAA GGGAGATACT CGGAAGCGGA ACCATTGTAC
AAACAAGCAA TAGAAATCCA CAAAGTCGCC CTGCCTGCCA ATCATCCACA ACGTGCCTCT
GGCCTCAATA ACCTAGCAGG TTTATATCGT GCTCAAGGGA GATACTCGGA AGCGGAACCA
TTGTTGAAAC AAGCAATAGA AATCTACAAA GTCGCCCTGC CTGCCAATCA TCCATTCCTG
GCAACCAACC TCAACAACCT AGCAGAATTA TATCGTGCTC AAGGGAGATA CTCGGAAGCG
GAACCATTGT ACAAACAAGC AATAGAAATC GACAATATCG CCCTGCCTGC CAATCATCCA
GAGCTGGCAA CCAACCTCAA CAACCTAGCA GAATTATATC GTGCTCAAGG GAGATACTCG
GAAGCGGAAC CATTGTACAA ACAAGCAATA GAAGTCGACA AAATCGCCCT GCCTGCCAAT
CATCCATCCC TGGCAACCAA CCTCAACAAC CTAGCAGAAT TATATCGTGC TCAAGGGAGA
TACTCGGAAG CGGAACCATT GTACAAACAA GCAATAGAAG TCGACAAAAT CGCCCTGCCT
GCCAATCATC CATCCCTGGC AACCCACCTC AACAACCTAG CAGTTTTATA TTCTGCTCAA
GGGAGATACT CGGAAGCGGA ACCATTGTAC AAACAAGCAA TAGAAGTCGA CAAAATCGCC
CTGCCTGCCA ATCATCCATC CCTGGCAACC AACCTCAACA ACCTAGCAGA ATTATATCAT
GCTCAAGGGA GATACTCGGA AGCGGAACCA TTGTACAAAC AAGCAATAGA AATCCACAAA
GTCGCCCTGC CTGCCAATCA TCCATCCCTG GCAACCAACC TCAACAACCT AGCAGAATTA
TATCGTGCTC AAGGGAGATA CTCGGAAGCG GAACCATTGT ACAAACAAGC AATAGAAATC
CACAAAGTCG CCCTGCCTGC GAATCATCCA CAACGTGCCT CTTGCCTCAA TAACCTAGCT
TTATTATATG CATCTCAAGG GAGATACTCG GAAGCACTCA AACTGATGCT CAAAGCCAGC
AAAATCGAAG ATAAAACTAT CCAGGCTATC TTTGCTTCTA GCTCCGAAAG CGATCGCCTC
GCCCATATCA AACAAGAAGT CAGACCTAAC CTAGAGACAT TCCTCTCCTT AGTCTACCAA
CATTTCCCCC ACTCCCCAGA AGCCAAACAA GCAGCATTAA ATCTCGTCCT CAAACGGAAA
TCTCTAACAG CAACAGCCAT GGCCGCTCAA AACCAAGCCG TATTCAGTGG CCGTTATCCC
CAACTCCAAG AAATTTTCCC ACAGTGGCGG CGAAAGTGCG ACCAACTTTT AACACTTACC
TATGAAGTAC CCCGACCAGA AAAACGGGAA ACTCACAAAC AACAGTTAGC TCAACTGCAA
AAAGAATGTA ATGAGTTAGA AAGAAAGTTA ACCCAACAAA TGCCAGAAAT TGAAATACAG
CAACAAATGG GAGACATACG GGCAGTCGCG TCAGAGTTAT CAGAGGGGGA AAAATTATTG
GAATTTGTGC AGTTTGATGT CTATGATGTT CAGGAGAAGA GTTGGGGAAA AGCCCGGTAT
CTGGCATTTG TTTTAGCTGG GGGAAAACCT TCTGAAGTAG AAATGATTGA TTTAGGAGAA
GCAGAAAATA TCGATCGCCT AATTTCGACT TACCGAAACT CAGTAATAAA GTGGCCACTA
CCACAACAGA TGAATATGTG GAATAATAAA CCAAATTCTA CAGAAACAGA AACACCTACA
AAACATTATA TCTATGACTC CCAACCAGGG AAAGAACTAC GAGAAGCAGT TTTTGATAAA
TTGCGAGATA AATTAACAGG TTGCTCTCAT CTAGTATTAG CTCCCGATGG TGATTTAAAC
CTAGTGCCAT TTCAAATCTT ACCAGAAGAT GATGGGAAAA CAACATTGCA GGATGAGTAC
AACATTAGTT ATGTCAGCGT TGGGCGAGAA TTATTGCGGC GTCGGATCAA AACAAAACCC
ACAGCAAACC CACCATTAAT TATGGCCGAC CCTAACTTTG ATTGGCCTCA GAATGCTCCA
GATATGGCAC AACAAAAAGA AAGTCCGGCT GTTTCTGGTC TGAATGTTCA GCCAATGTTA
GGTACTCTGG CAGGGATAAC ATTTCCACGA GTGAAAGCAA CCGCTGATCT TGCCAAAACT
ATTGGACAAC AGTTAGGAGT CAAACCTTTT CTGGGAAATG AGGCAACTGC CGATCGCCTG
CTCAAATGTC AATCTCCCAA ACAGCTCATA GTTGCCACCC ACGGTTATTA CTCCCAGAGA
AAAGATAAAT ATCTGACTTT GTTGAAAGAG TTACTGTCCT CTTCCCAGGG AAAAGAAGTA
GAGATATTAG AAAAAAATTA TGGTTTACTG GATGAAGAGT TTCTGGCATT TATTGAAAGA
TACCGAAACT CAGAAAATAG GGATAATAAA ATCAGAGAAA AGTTAAGAGC GATCGCCCCT
CTAGTGAAAC AGCAGCTCAA GACGACCCCA GTCAAACCCC CAGTTAATAA CATGGATTTT
GAGACCTTCA AACCCAACCG CCACCAAGCA AAAATCGAAA ACCCGATGAT GGGTTCCGCC
GTCGCTTTTA CAGGTGCCAA CACCTGGCTT TCTGGTGGCC AACTCCCCCC AGAATTCCCA
ACAATGGCAT TTGCTCAAGA TATTGCCGGG CTTGACCTCT GGGAAACAGA GCTAGTAATT
TTAATCGCCT GTGAAAGCGG GTTAGGAGAC GTGCAAACGG GAGAAGGAGT ATTCGGTTTG
CGTCGTGCCT TTGCCGTTGC GGGGAATCAA ACATTAATAA TGAGTTTGTG GAGCGTACCA
ACATTAGCAA CCATGTTATT AATGGAGCAA TTTTTAGATG ATTCACGGTC AGGAATGAGT
GCAGGGGCCG CCTTAAGAAA AGCCCAGAAA TATATCAGAA ATATTACAGT TGGAGAACTA
CAAAAAAGTA AATTAGGGAG TGATATTTTA GGGGAATTAA ATTTAGGAAA AAATCTAAAA
ATTGAGAGTA AACCATTAGC TCATCCTTAT TTTTGGGGAG CGTGGATATG TCAGTCAGTC
AGTGAGTTAG GTATTAGGTT TTAG
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| Protein sequence | MTEEQFQEQL KARLDLIDQL LTCSSGEEQA ILHANSQLLD AAFVKTMELV AAKMVEDGEK
NAKWLQGLAN ELAEMMEAKE KLDVQVMELY NAGKYDEAIP IAEQGVTLAR QLWGESHAEV
ATNLNNLTLL YESQGRHSEA EPLYKQAIEI HKVALPANHP SLATNLNNLA NLYRAQGRYS
EAEPLYKQAI EIFKIALPAN HPSLATNLNN LAGLYESQGR YSEAEPLYKQ AIEIFKIALP
ANHPSLATNL NNLANLYRAQ GRYSEAEPLY KQAIEIDNIA LPANHPSLAR DLNNLAELYR
AQGRYSEAEP LYKQAIEIHK VALPANHPSL ATNLNNLANL YRAQGRYSEA EPLYKQAIEI
FKIALPANHP SLATNLNNLA GLYESQGRYS EAEPLFKKAI EIDNIALPAN HPSLATDLNN
LAGLYSSQGR YSEAEPLYKQ AIEIDKIALP ANHPDLATHL NNLAGLYKSQ GRYSEAEPLY
KQAIEIHKVA LPANHPQRAS GLNNLAGLYR AQGRYSEAEP LLKQAIEIYK VALPANHPFL
ATNLNNLAEL YRAQGRYSEA EPLYKQAIEI DNIALPANHP ELATNLNNLA ELYRAQGRYS
EAEPLYKQAI EVDKIALPAN HPSLATNLNN LAELYRAQGR YSEAEPLYKQ AIEVDKIALP
ANHPSLATHL NNLAVLYSAQ GRYSEAEPLY KQAIEVDKIA LPANHPSLAT NLNNLAELYH
AQGRYSEAEP LYKQAIEIHK VALPANHPSL ATNLNNLAEL YRAQGRYSEA EPLYKQAIEI
HKVALPANHP QRASCLNNLA LLYASQGRYS EALKLMLKAS KIEDKTIQAI FASSSESDRL
AHIKQEVRPN LETFLSLVYQ HFPHSPEAKQ AALNLVLKRK SLTATAMAAQ NQAVFSGRYP
QLQEIFPQWR RKCDQLLTLT YEVPRPEKRE THKQQLAQLQ KECNELERKL TQQMPEIEIQ
QQMGDIRAVA SELSEGEKLL EFVQFDVYDV QEKSWGKARY LAFVLAGGKP SEVEMIDLGE
AENIDRLIST YRNSVIKWPL PQQMNMWNNK PNSTETETPT KHYIYDSQPG KELREAVFDK
LRDKLTGCSH LVLAPDGDLN LVPFQILPED DGKTTLQDEY NISYVSVGRE LLRRRIKTKP
TANPPLIMAD PNFDWPQNAP DMAQQKESPA VSGLNVQPML GTLAGITFPR VKATADLAKT
IGQQLGVKPF LGNEATADRL LKCQSPKQLI VATHGYYSQR KDKYLTLLKE LLSSSQGKEV
EILEKNYGLL DEEFLAFIER YRNSENRDNK IREKLRAIAP LVKQQLKTTP VKPPVNNMDF
ETFKPNRHQA KIENPMMGSA VAFTGANTWL SGGQLPPEFP TMAFAQDIAG LDLWETELVI
LIACESGLGD VQTGEGVFGL RRAFAVAGNQ TLIMSLWSVP TLATMLLMEQ FLDDSRSGMS
AGAALRKAQK YIRNITVGEL QKSKLGSDIL GELNLGKNLK IESKPLAHPY FWGAWICQSV
SELGIRF
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