| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1040 |
|---|
| Symbol | |
|---|
| ID | 4242003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1629979 |
|---|
| End bp | 1630473 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638106273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720885 |
|---|
| Protein GI | 113474824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00475702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.146874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTAC AACCACCTCC ACCCCCATCT ATTACTCCAC GCCAGATGGA TTTGTTGCGG
ATTGTTGCTT ATATGGCATG GTCAGATGGA CAACTGGCGC AAGAGGAAGT TGAGCTAATG
TTGAATCGTT TTAGTAGTTT ATTTGCTACA GGAGATTCCC AACAACAACT TCAAGAGGAA
TTACGGGATT ATCTCATGCA AAATATACCA TTGGAGGAGT CAATCCCCAA ATTAGAAAGT
CAACAAGAAC GGGAACTTGT GCTGAAATTA GGTTATGAGG TAATCGCTTG TAGTGCTCGT
ACTCCTGAAG AAGCAAATAT CAATGAAGAG GAAGAAGTTG CTTATCAAAA GTTAAAGCAG
TTGCTTAATA TTTCAAAGGA TGTAGTAAAG CGTATAGAAG CTGAGGCTAA TACTGAACTT
AATCAGCAAA AACAACAAGG AATTGTTGAG ATGATGACTC ATGGTCTAGA GCAACATTTA
CACAAACAAA ATTAA
|
|---|
| Protein sequence | MTVQPPPPPS ITPRQMDLLR IVAYMAWSDG QLAQEEVELM LNRFSSLFAT GDSQQQLQEE
LRDYLMQNIP LEESIPKLES QQERELVLKL GYEVIACSAR TPEEANINEE EEVAYQKLKQ
LLNISKDVVK RIEAEANTEL NQQKQQGIVE MMTHGLEQHL HKQN
|
|---|
| |