Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1009 |
Symbol | |
ID | 4245536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1574817 |
End bp | 1575638 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638106247 |
Product | TPR repeat-containing protein |
Protein accession | YP_720859 |
Protein GI | 113474798 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0715627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACT TAATTCAGAA ACTTTTCATA ACAATCCTTT TATTCTTCCT ATTTTGCTTT AGTAACCCAT CAAATGTGAT AGCTGCCACT CAATCACAAA ATATTACCCC TGCTCAATTA GAAGAATTAC ATAATCTATT TGATCAAGCC TTAAATGCTA GTAATAACGG TGAGTTTGCC AATGCCGAAA AGTTATGGAC TCAAATTATA GAACTATATC CTGACAACCC TGCCATCTGG AGCAACAGAG GTAACATCAG ACTGAGCCAA AACAAAATAG AAGAGGCAAT ATCCGATTAT GAAAAAGCTA TAGAAATCTT ACCCTTAGCT CCTGATGCTT ACCTAAATCG TGGTATAGCT TATGAAAGAA TCAAAAAATG GTCAGAGGCG ATCGCGGATT ACAATCAAGT CATAGAATTA GATCCAACAG ACCCAGTTGC CTATAATAAC CGTGGAAATG CAGAAGGAGG ACTAGGAAAA TGGGAAAAAG CCACTGAAGA TTACAAGAAA GCTTCTGAAT TAGCTCCTGA ATATGCCTTT GCTCTTGCCA ATTATTCTTT AGCTCTTTAC CAAATTGGAC AAACTCAAAA AGCAGTGCAA ACCATGAAAA GTCTCGTTCG TAAATATCCT AACTTTGCTG ATATGCGGGC AGCTTTAACC GCTTGTCTCT GGGAACAAGG CAAACCCGGA GAAGCGGAGA GTAACTGGGT AGCTGCTGTA GGATTAGATC CTCGCTATCA AGACCTTAAT TGGGTAACTA ATGTTCGTCG TTGGCCACCC ACATTAATTA ATAGTTTGGA GAAATTTATC AAAATAGAAT AA
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Protein sequence | MLHLIQKLFI TILLFFLFCF SNPSNVIAAT QSQNITPAQL EELHNLFDQA LNASNNGEFA NAEKLWTQII ELYPDNPAIW SNRGNIRLSQ NKIEEAISDY EKAIEILPLA PDAYLNRGIA YERIKKWSEA IADYNQVIEL DPTDPVAYNN RGNAEGGLGK WEKATEDYKK ASELAPEYAF ALANYSLALY QIGQTQKAVQ TMKSLVRKYP NFADMRAALT ACLWEQGKPG EAESNWVAAV GLDPRYQDLN WVTNVRRWPP TLINSLEKFI KIE
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