| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0889 |
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| Symbol | |
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| ID | 4245552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1409261 |
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| End bp | 1410328 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638106151 |
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| Product | branched chain amino acid aminotransferase |
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| Protein accession | YP_720763 |
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| Protein GI | 113474702 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.159236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAG TTAATTCTCA AATATCTATA GAAAAAACTA GCCACTCTCG GATTAAAGAA
CAGGATATTA ATAATACTCC CTTTGGTAAA GTATTTAGCG ATCATATGTT GGTTGCTACC
TATGCAAATA ATAGTTGGCA AGAGGTAAAA ATTACTCCCT ATGGTAATAT TTCTATTCGT
CCTTCTCTCT CTGTACTTCA TTATGGTCAG GCAGTTTTTG AAGGTTTAAA AGCTTATAAA
AATTATCAGG GAAAACCTGT ATTATTTCGG TTAGAAGCTA ATTATAAAAG AATAAATAAT
TCAGCTTTTA GATTATGTAT GCCATCCATT CCTAAAGAAA TTTTTATAGA TGGTTTAAAG
GAATTAATTA GACTAGATAC TGATTGGATT CCTACTAAAT CAGATAGCGC ATTATATATT
CGACCTATTT ATTTCGCTAC AGATGAATCT GTCGGTCTCA AGCCTGCAAA TAGTTATAAG
TTTATTATTT TGTCTTCCCC TACAGGTACA TTTTATTCGG CACCAGTTAA GTTAATTGTT
ACAGATAAAT ATGTCCGAGC TTCTGAAGGT GGAACTGGTG CAGCTAAATG TGCTGGGAAT
TATGCTGGTA GTTTTTTAGC AGATAAAGAA GCTAAAGAAC AAGGTTATGA TAATGTTTTA
TGGTTGGATG GAAAGGAAAA AAAATATATT GAAGAATGTG GTACGATGAA TGTTGCTTTT
GTAATTAATG ATGTTTTGAT TACTCCTAAG TTGACAGGAA GTATATTAGG GGGAATTACT
CGAGATAGTG CATTAACTTT ATTTAGAGAT ATGGGTGTTA AAGTTGAGGA AAGATTAATC
TCTATTGATG AGGTTGCAAA GGCTTATGAA GCAGGAAATA TTTCTGAGGC TTTTGGTATG
GGTACTGCTG CTACAATTGC TCATATTTCT GTTATTAACT ATCAAGGTAA AGATATGATT
TTACCTCCTG TTGATGAACG AAAATATGCT TCTCAAGTTT TGCAAAAATT AGAAGATATT
AAAACTGGTA AAGTCACTGA CCCCTATGGT TGGATTTGTC AACTTTAA
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| Protein sequence | MQIVNSQISI EKTSHSRIKE QDINNTPFGK VFSDHMLVAT YANNSWQEVK ITPYGNISIR
PSLSVLHYGQ AVFEGLKAYK NYQGKPVLFR LEANYKRINN SAFRLCMPSI PKEIFIDGLK
ELIRLDTDWI PTKSDSALYI RPIYFATDES VGLKPANSYK FIILSSPTGT FYSAPVKLIV
TDKYVRASEG GTGAAKCAGN YAGSFLADKE AKEQGYDNVL WLDGKEKKYI EECGTMNVAF
VINDVLITPK LTGSILGGIT RDSALTLFRD MGVKVEERLI SIDEVAKAYE AGNISEAFGM
GTAATIAHIS VINYQGKDMI LPPVDERKYA SQVLQKLEDI KTGKVTDPYG WICQL
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