Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0879 |
Symbol | |
ID | 4245542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1394263 |
End bp | 1395375 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106142 |
Product | geranylgeranyl reductase |
Protein accession | YP_720754 |
Protein GI | 113474693 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.917387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.163245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT GTATAATAGT TGGTTCCGGA CCCGCAGGAG CAAGTGCTGC ATATCATCTG GCAAAAAACG GACGTTCTGT ATTAGTTTTA GAAAAAGAAA CTTTACCTCG ATATAAACCC TGTGGAGGTG GAGTTTCTCC TATTGTTCAA GAATGGTTTG ATTTTGATTT TACACCAGCT ATTTCTTTGA AAATTAACTC CATTTGTTAT ACTTGGAAAA AAGGCGATTT AGTAGAAGTA AAATTACAAA ATAAACAACC TATTTGGATG GTACGTCGAG AAATTTTTGA TTATTTTATT ATTCAAAAAG CACAAAAACA AGGGGCTGAA ATTAGAGATA AAACTAGAGT TATAGGTATA GAATTTAAGA ACAATAATTG GCAAGTTTAT ACAGATAATC AGTCATTTAC TTCTCCCTAT TTAATTGCTG CTGATGGTGC TAAAGGTTCA ATGGCAAAAT GGTTAGGATT TAAAAATCGT AAACGTTTTG CTGGTGGAGC GATGGAAATA GAAATACCAG TTAAAAATCA GAAAATTGAT AGTGCTTATT TTGAGTTTGG GATGTTAAAT AATGGCTATG TTTGGAATTT TCCTAAAGCT GATGGATACT CAATAGGGGT TGGTACATTT TGGCGAAAAC ACGGTCAAAA TTTTACGGCT TTATTAACAG AATATACGAG TATGTTTGAG GTAAATATTC AAAATGTTCA GAAGTTTGGT CATCCTTTAT GTTTATGGAA TGGAAATCAA AAATTACATA CTCAAAATGC TGTTTTAGCA GGAGAAGCAG CTTGTATTGT TGACCCTTTT ACTGCAGAAG GAATTCGCCC TTCTATATTT ACAGGTGTTA AAGCAGCAAG AGCAATACAT AATTCTCTAA ATGGTGATTT ATTTGCTTTA GAAAAGTATA CTCAAATAAT TAATGAAGAA TGGGGGAAAG ATATGGTATG GGCACAACGT TTAGCTCAAG GATTTTCTCG TTTTTCACAT ATTGGTTATC AAGTAGGTGT GAAGCGACCT CATGCTACTA ATATTATGAC AAAAATTATG TCAGGAGAAT TGCGTTATTC TGATGTAGTG GGTTCTGCTT TACGACGACT TTGGCAAAGG TGA
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Protein sequence | MFDCIIVGSG PAGASAAYHL AKNGRSVLVL EKETLPRYKP CGGGVSPIVQ EWFDFDFTPA ISLKINSICY TWKKGDLVEV KLQNKQPIWM VRREIFDYFI IQKAQKQGAE IRDKTRVIGI EFKNNNWQVY TDNQSFTSPY LIAADGAKGS MAKWLGFKNR KRFAGGAMEI EIPVKNQKID SAYFEFGMLN NGYVWNFPKA DGYSIGVGTF WRKHGQNFTA LLTEYTSMFE VNIQNVQKFG HPLCLWNGNQ KLHTQNAVLA GEAACIVDPF TAEGIRPSIF TGVKAARAIH NSLNGDLFAL EKYTQIINEE WGKDMVWAQR LAQGFSRFSH IGYQVGVKRP HATNIMTKIM SGELRYSDVV GSALRRLWQR
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