Gene Tery_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0879 
Symbol 
ID4245542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1394263 
End bp1395375 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content34% 
IMG OID638106142 
Productgeranylgeranyl reductase 
Protein accessionYP_720754 
Protein GI113474693 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.917387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT GTATAATAGT TGGTTCCGGA CCCGCAGGAG CAAGTGCTGC ATATCATCTG 
GCAAAAAACG GACGTTCTGT ATTAGTTTTA GAAAAAGAAA CTTTACCTCG ATATAAACCC
TGTGGAGGTG GAGTTTCTCC TATTGTTCAA GAATGGTTTG ATTTTGATTT TACACCAGCT
ATTTCTTTGA AAATTAACTC CATTTGTTAT ACTTGGAAAA AAGGCGATTT AGTAGAAGTA
AAATTACAAA ATAAACAACC TATTTGGATG GTACGTCGAG AAATTTTTGA TTATTTTATT
ATTCAAAAAG CACAAAAACA AGGGGCTGAA ATTAGAGATA AAACTAGAGT TATAGGTATA
GAATTTAAGA ACAATAATTG GCAAGTTTAT ACAGATAATC AGTCATTTAC TTCTCCCTAT
TTAATTGCTG CTGATGGTGC TAAAGGTTCA ATGGCAAAAT GGTTAGGATT TAAAAATCGT
AAACGTTTTG CTGGTGGAGC GATGGAAATA GAAATACCAG TTAAAAATCA GAAAATTGAT
AGTGCTTATT TTGAGTTTGG GATGTTAAAT AATGGCTATG TTTGGAATTT TCCTAAAGCT
GATGGATACT CAATAGGGGT TGGTACATTT TGGCGAAAAC ACGGTCAAAA TTTTACGGCT
TTATTAACAG AATATACGAG TATGTTTGAG GTAAATATTC AAAATGTTCA GAAGTTTGGT
CATCCTTTAT GTTTATGGAA TGGAAATCAA AAATTACATA CTCAAAATGC TGTTTTAGCA
GGAGAAGCAG CTTGTATTGT TGACCCTTTT ACTGCAGAAG GAATTCGCCC TTCTATATTT
ACAGGTGTTA AAGCAGCAAG AGCAATACAT AATTCTCTAA ATGGTGATTT ATTTGCTTTA
GAAAAGTATA CTCAAATAAT TAATGAAGAA TGGGGGAAAG ATATGGTATG GGCACAACGT
TTAGCTCAAG GATTTTCTCG TTTTTCACAT ATTGGTTATC AAGTAGGTGT GAAGCGACCT
CATGCTACTA ATATTATGAC AAAAATTATG TCAGGAGAAT TGCGTTATTC TGATGTAGTG
GGTTCTGCTT TACGACGACT TTGGCAAAGG TGA
 
Protein sequence
MFDCIIVGSG PAGASAAYHL AKNGRSVLVL EKETLPRYKP CGGGVSPIVQ EWFDFDFTPA 
ISLKINSICY TWKKGDLVEV KLQNKQPIWM VRREIFDYFI IQKAQKQGAE IRDKTRVIGI
EFKNNNWQVY TDNQSFTSPY LIAADGAKGS MAKWLGFKNR KRFAGGAMEI EIPVKNQKID
SAYFEFGMLN NGYVWNFPKA DGYSIGVGTF WRKHGQNFTA LLTEYTSMFE VNIQNVQKFG
HPLCLWNGNQ KLHTQNAVLA GEAACIVDPF TAEGIRPSIF TGVKAARAIH NSLNGDLFAL
EKYTQIINEE WGKDMVWAQR LAQGFSRFSH IGYQVGVKRP HATNIMTKIM SGELRYSDVV
GSALRRLWQR