| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0765 |
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| Symbol | |
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| ID | 4243000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1223413 |
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| End bp | 1226955 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638106053 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_720665 |
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| Protein GI | 113474604 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.82828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTTGA CGGGAGGAGG CGGAGTTGGT AAATCTGCTT TAGCTTATCA TTTTGCTACT
GTCCATCGGT ATGAGTTTCC TGACGGAGTG ATAGGTTTGC GAGTGGATAA AAAGGATGTC
AATAGTATTG CCCGTCAGTT GGCGAGAATC ATTGGCCATC CTATTGATGA GGATGATGAT
ATAGAAGCTA GGGAGATTAT GCAAAGGTTC TTTGCTCCCA GGCGGATGTT GCTGATTTTT
GATAATGCGG AAGAGGCGAA AATTAAGGTA CTACGTCCGG GGGGAAACCG TTGTGCTATA
ATTGTTACTA CTAGAAAGCA GAATTTGCCT GTTTCTTTGG ATTTGTCTGA AACTGCTACA
ATTAGGTTAA GATCGCTCCC GGAAAATGAT GCTCTGGACT TACTGAGGAA TATTGTGGGT
CAAAGTGAGA TTGATAATGC CTTAGCTGCA GCAAAACGGA TAGCTGAAGT TGTTGGTAGG
TTACCTTTGG CCCTACAGGT TGCAGGTGGT ACTCTGCGGG GAAAAAGGCG ATCGCTGGCT
ACTTATGCTG ATTCTCTACA AAGGCAAAAG GAGCAATTGA GACTTTTACC ACGACTACGC
TTGGGGGAAG ATCCAGATTT TAATGTGGTA GCTTGTTTGA ATTTGAGTTT GGAGTTTTTG
CAGGAGGAGG AAATTGATTT TTTTGCTTGT CTGGGGGTTT GTGGGGAGGA TGGGTTTGCT
CTGAGAACGG CAATGGCAGC AGGGGGTTGT GAGGATGAGT TTGATGCTGA GGATTTTTTA
AATAAGTTGT ATGAGGTATC GTTGTTGAAT TCTGAGGAAG TTCAACAGGA CCGTTTTGTA
TTACATCCTT TGGTGCGGGA GTATGCTAGG TCTGTTGCTC AAGATAGGAA TTTGCTGAGT
TTGGCTCAGG AACGTCATGC TCAGTTTTTT GTGGAGCGGT TACAGTTTGA TGATTTGGAG
GATGAGACGG TTATTGCGGA AGTTGCTACA GATTTGAGTG ATGTGTTCTT AGCTGCTGAG
TGGTTGCAGA GTTATTGGGG TCAGACGACG GAGAGTAGAA AGGAAGCTTA TGAATTTGTT
TTAAAGTTGC AGCCGTTATT TGAACATTAT GGCTATTGGG AACAGGGAAT TAGTCTGATG
GAAAGACTTC AAACTTGGGC AGAACAATTT GATGATTGGT ATACAATAGT TAGATGTCAA
ATGCACCAAG GTCGGTATTG GTCTTTTGTA GAAGAATTTG AACGAGCAGA AGAAATCTTA
ATTTCTGCAA AAGATATTTC ATCTGATGAT CAAAAAATTG AAGATATAGA TACGCGGGGG
AAGCGCCATT CTAAAGTACT AAATGTACTA GGTGGTGTTT ATAAGAAACA AGGTAAGACG
GAAAAAGCTA TTGAAACTTT TAAAGCACAA ATAGCAATTG ATGAAAGTCT TGATGATAAA
AAGTCTCTTA CTATTGCTTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC
AAGGAAGCAC AGCAGGCTTT TGAAACCGAA ATAGACCTCG CTAAAAGTAT TGATGACAAA
CATGGACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC
AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA
CGTGAACTTG CTATTGCCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC
AAGGAAGCAC AGCACGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA
CATCAACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC
AAGGAAGCAC AGGAGGCTTT TGAAAAGGAA ATAGAGCTGG CTAAAAGTCT TGATGACAAA
CATGGACTTG CTATTGGCTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC
AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA
CATGGACTTG CTATTGGCTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC
AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA
CATCAACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC
AAGGAAGCAC AGCACGCTTT TGAAACCGAA ATAGACCTCG CTAAAAGTCT TGATGACAAA
CATGGACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGAGAAACTC
AAGGAAGCAG AGCACGCTTT TGAAAAAACA ATCAAGAATA CAGACTTCAA TCATAAACAG
TCTCTTACTC TTGGCTGGAA GCGTTTAGAA AGAGTGCAAA AAAAGAGGAA ATTAAAGGAA
GCACAACAAG CTTTGAAAGA ACAAATAGAG AACGCTAAAA GTCTGGATGA CCAAAAATCT
CTTGCTATTA GCTGGAATTC TCTAGGAGAG TTGCTAAAAA AAGAGAGGAA ACTAGATGAA
GCACAGCAGG CTTTTGAAAT AGTAATTAAT ATCAGCCAAA ATTTCAAAGA TCAATATTTT
TTAACTGCGT GGGCATTACA TAATTTAGGC ATAATTTATA AATCAAAAAA AGAATTTGAA
ACAGCCGAAA AATTCCTCAA GGAAAGCGTC GAAATTTTTA AAGATAACAA TTATTTACCA
GGTTTAACAA AAGTGATGAG TACCCTAGGC AGTGTTCTAG AAAAACAACA GAAATGGAAA
GAAGCAAAGA AAGTCTTAGA AGAAAGTTAC AGTTTTGCCG AAAAACTTGG GGATGAATTA
GGACAAGCTA TTATAGCCAA TAGCTTAGGA CAAGTTATGG CTCATCTGGA AGAAGACGAA
GCTCATGAGC GTTCCTTTAT GTACTTTAAC CAAAGCATTA AACTAGGAAA AAAACTAAAT
AATGAACCTC ACCTAGCAAA AGTATATACA GCAAGAGGAA AAATATTTTG CAACCGCGGA
CAGAACGAAC GCGCTGTTGA AGAATTGTCT CAAGGGTTTG AAATTGATGT CAAATTAGGC
AACATCCGAG GTTTAAGGAT AATTATTCCC AGTATAACCC GTATTTTATC TACATTAGGA
AAACAAGAAG AAGCATTAGC ATATTGTGAG CGGGCACTAA AAGTTGCTCC TAATAATACC
AGTTTCCAAG AATTATATCA CAAAATTCAG AGAGCGATCG CCACAGGTAC TCAGCCAACC
TTCTTTATAA CAGGTTCAGT GCAATACATT CGGTATGATA AAAAAGAAAA GTTATACAGG
GGTAGAATTA GTCCAGATGA TGGAACCTTA GACATTTTCT TTAACGACAA ATACATGAAT
ACTGAGTCTA TATCTCAATT AACCGAAGGA GAGTTAGTAG AAGTTGAGGT CAAAGAAAAA
AATGGAAAAC GCTATGCAAA ACAAATTAGT GTAATTGAGG AAGAAGAAGA TGATGATTGG
TAA
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| Protein sequence | MGLTGGGGVG KSALAYHFAT VHRYEFPDGV IGLRVDKKDV NSIARQLARI IGHPIDEDDD
IEAREIMQRF FAPRRMLLIF DNAEEAKIKV LRPGGNRCAI IVTTRKQNLP VSLDLSETAT
IRLRSLPEND ALDLLRNIVG QSEIDNALAA AKRIAEVVGR LPLALQVAGG TLRGKRRSLA
TYADSLQRQK EQLRLLPRLR LGEDPDFNVV ACLNLSLEFL QEEEIDFFAC LGVCGEDGFA
LRTAMAAGGC EDEFDAEDFL NKLYEVSLLN SEEVQQDRFV LHPLVREYAR SVAQDRNLLS
LAQERHAQFF VERLQFDDLE DETVIAEVAT DLSDVFLAAE WLQSYWGQTT ESRKEAYEFV
LKLQPLFEHY GYWEQGISLM ERLQTWAEQF DDWYTIVRCQ MHQGRYWSFV EEFERAEEIL
ISAKDISSDD QKIEDIDTRG KRHSKVLNVL GGVYKKQGKT EKAIETFKAQ IAIDESLDDK
KSLTIAWNRL GGVLEKQGKF KEAQQAFETE IDLAKSIDDK HGLAIGWNCL GGVLEKQGQF
KEAQQAFEKG IELAKSLDDK RELAIAWNCL GGVLEKQGKF KEAQHAFEKG IELAKSLDDK
HQLAIGWNCL GGVLEKQGKF KEAQEAFEKE IELAKSLDDK HGLAIGWNRL GGVLEKQGQF
KEAQQAFEKG IELAKSLDDK HGLAIGWNRL GGVLEKQGQF KEAQQAFEKG IELAKSLDDK
HQLAIGWNCL GGVLEKQGQF KEAQHAFETE IDLAKSLDDK HGLAIGWNCL GGVLEKQEKL
KEAEHAFEKT IKNTDFNHKQ SLTLGWKRLE RVQKKRKLKE AQQALKEQIE NAKSLDDQKS
LAISWNSLGE LLKKERKLDE AQQAFEIVIN ISQNFKDQYF LTAWALHNLG IIYKSKKEFE
TAEKFLKESV EIFKDNNYLP GLTKVMSTLG SVLEKQQKWK EAKKVLEESY SFAEKLGDEL
GQAIIANSLG QVMAHLEEDE AHERSFMYFN QSIKLGKKLN NEPHLAKVYT ARGKIFCNRG
QNERAVEELS QGFEIDVKLG NIRGLRIIIP SITRILSTLG KQEEALAYCE RALKVAPNNT
SFQELYHKIQ RAIATGTQPT FFITGSVQYI RYDKKEKLYR GRISPDDGTL DIFFNDKYMN
TESISQLTEG ELVEVEVKEK NGKRYAKQIS VIEEEEDDDW
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