| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0623 |
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| Symbol | |
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| ID | 4241994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1012706 |
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| End bp | 1013788 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105925 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_720538 |
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| Protein GI | 113474477 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00726041 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAATA ATTTTGATTC TACAGAAGTA CAACCCTTAG AAAGTGATGA ATTTCTCCCT
CCTATGAGTC GTTGGAATAA GATAGGTGGA ATGTTCTTAT TGGGTACATT TGGTGCAGCT
ATTGCCCTAA TTAGCCTAGT AAAGTATAAC CCTACTGTGA GAACAGAAGC TATTGCTCGA
CCAATAGGAG ACGTAAGAAT TGTTCAAGCA CCTACAGAGG GTAAAATTGA CAGTATAGAA
GTAAATGAAA ACCAAGTAGT TCATGAAGGA GATGCGATCG CACGCATAGA TGAATCTGCT
CTGAGTCGTC AAAAAACTCA ACTACAAGAA AAAATCCAAC AGTGCGACAT AGAATTAGAG
CAAATTAATC AACAAATATC TGCTTTAGAG GTTCAAATCT TAGCTACTGC TAGACCTCAA
ACTTTTCAGT ATCAGTCACA ATTTACCATA GCAGAAAATA ATAAGATAGA TAAATCATCT
ATTGAGTCAG CTATTTTAGA GCTATCCTTA TCTTTGCCTA AAGTTGCTCA ACAGTTTGCT
AAAGATAGAC GGGACCTGAT AGTTAAGCGA ACCGAATTAA TTAAAGAATT GACTGCTGGT
AACAGAGAAC TAGAACAGGT AAATGCTAAA CTTAATAATA GTGTAATCAT TGCTCCTGCA
AATGGTACTA TATTTAAGTT ATCTTTGCGT AATCCTGGGC AAACTGTCGA ATCAGGAGCA
GCGATCGCTC AGATAGTCCC TAACAACGCG CATATAGTAT TTAAGGCTAG GGTGACAGCA
GCAGATATTG CCAAAGTAAA AATAGGTCAA CCCGTACAAA TTCGAGTTTC AGCTTATCCT
TTTCCTGATT ATGGTATTCT CAAAGGAACT GTACGTTCAA TTTCTCCAGA TGCTATCGCT
CATCAAGTAC TTAAAGAAGC TTATTATGAG GTCACTATAG AACCTGAAAA ACCTTACTTA
GTCAAAGGCG GTAGTCAATA TCTGATTCAA CCAGGAATGG AAGGTCGAGC TGATATTATT
TCTTCCCAAG AGACCGTGCT AACTTTTGTT CTCAGAAAAC TTAGATTGTT AACTGATTTT
TAG
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| Protein sequence | MFNNFDSTEV QPLESDEFLP PMSRWNKIGG MFLLGTFGAA IALISLVKYN PTVRTEAIAR
PIGDVRIVQA PTEGKIDSIE VNENQVVHEG DAIARIDESA LSRQKTQLQE KIQQCDIELE
QINQQISALE VQILATARPQ TFQYQSQFTI AENNKIDKSS IESAILELSL SLPKVAQQFA
KDRRDLIVKR TELIKELTAG NRELEQVNAK LNNSVIIAPA NGTIFKLSLR NPGQTVESGA
AIAQIVPNNA HIVFKARVTA ADIAKVKIGQ PVQIRVSAYP FPDYGILKGT VRSISPDAIA
HQVLKEAYYE VTIEPEKPYL VKGGSQYLIQ PGMEGRADII SSQETVLTFV LRKLRLLTDF
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