Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0470 |
Symbol | |
ID | 4243764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 748560 |
End bp | 749348 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105785 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_720399 |
Protein GI | 113474338 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG CTAAAACCCT AAAAAGAAGT TTAGAAAATC CTAAACCATT TTTAAGCGTG GCATGGGATA CAAACGATAT ACCAGATCCA TGTAGTGTTA ATCCTAATCT TAAATGGAAA GACATTAACT GGAAAAAGGT AGAAAAGTAT GTGTTTAAGT TGCAAAAATT AATTTACAGA GCATCCAGCC GTGGCGAAAT CCGCAAGATG CGTAAATACC AAAAACTTCT GACCAAAAGT TACTACGCCT TGTTGCTAGC TGTTAGACGG GTGACTCAGG ATAACCAGGG TAAAAAAACT GCGGGTATAG ATGGTATAAA GAATCTACCC CCAATGCAAA GATTAAACCT GGTAAATTTA TTAAAAAGAC GCCGATTAAA AGCAAGCCCA ACCCGCAGAG TCTGGATACC AAAACCAGGG AGGAATGAAA AACGCCCATT AGGCATACCT ACTATGTATG ATAGGGCGCT ACAAGCCTTG GTTAAGTTGG GTAGGTCACC AGAGTGGGAG GCACACTTTG AATTTAACAG TTATAGCTTT AGACCAGGGC GGTCAACACA TGATGCTATT GCAATCTATC TCAGCATTAA TAAGAAACCA AAATATGTAT TAGATGCTGA CATATCCAAA TGTTTTGACC GAATTAATCA TGATGCTTTG TTGAGAAAAA TGGGTCAAAC ACCTTACAGA CGATTAATCA AACAATGGTT AAAATCTGGA GTGTTCGACA ACAAGCAATT CTCAAAAACT GTGGAAGGTA CACCACAAGG AGGGGTTATT AGTCCTTAA
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Protein sequence | MNKAKTLKRS LENPKPFLSV AWDTNDIPDP CSVNPNLKWK DINWKKVEKY VFKLQKLIYR ASSRGEIRKM RKYQKLLTKS YYALLLAVRR VTQDNQGKKT AGIDGIKNLP PMQRLNLVNL LKRRRLKASP TRRVWIPKPG RNEKRPLGIP TMYDRALQAL VKLGRSPEWE AHFEFNSYSF RPGRSTHDAI AIYLSINKKP KYVLDADISK CFDRINHDAL LRKMGQTPYR RLIKQWLKSG VFDNKQFSKT VEGTPQGGVI SP
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