| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0444 |
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| Symbol | |
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| ID | 4242222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 698789 |
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| End bp | 700753 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105762 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_720376 |
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| Protein GI | 113474315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTA TCCAAGGAAG TGAAATCAAA GTGTCCACCA ACACTCTCCC AAACAAGCAA
ACTAAAAAAC CATTATCTAA ATCTGCACCA GTCTTCGAGT TTGTTCAGTC TGTCGGTAAA
GTTACAACAG GTACAGTATT AGGCATTACT ATGCTGACTA GCTCATTAGT TGCTGGTGGA
TTAGTAGGTT TAGCCATTAG CTTTCGTAAT CTGCCAGATG TAAGGCTGCT CAAAAATTAT
ACACCTTCAG AAACAACTCG TATATATGAT ATCAAAGGTA GGCCCCTGGC AAGTCTCCAT
GATGAGGCCA ACCGAGAAGT CATGCCTCTA AAGCAAATTT CTCCAGACCT CAAACGAGCA
GTTTTGGCAA TCGAAGATAG TAATTTCTAC AATCACCTAG GGATTTATCC CATTGGAATT
ATGCGTGCTC TTGTAGCTAA CTTAGAGCGG GGTAAAACCG TTGAAGGTGG TTCTACTGTG
ACCATGCAAT TGGTAAAAAA TTTGTTTCTC TCCCCAACAG CCAAACTTAG TAGGAAAGTA
GCTGAAGCAG TTTTGGCAAT TAGAATGGAA CAAATTATGG CCAAAGATGA AATTTTAGAA
TTATACCTCA ACCAAATTTA CTGGGGCCAT AATTTATATG GAGTTGAAAC TGCAGCTCGA
AGCTATTTTA ATAAGTCTTC CGAAGATTTA ACCTTGGCGG AAGCGGCCTT GATGGCAGGT
ATGATTCCTG CGCCAGAGGA ATATAGCCCT TTTATTAACT ACAAAAAGTC TAAACAGCGT
CAGGCAACAG TTCTAGCCAG GATGCGAGAA CTAAATTGGA TTACCGCTCA AGAGGAAGCA
GAAGCTCTCA AACAACCATT GTATGTAGGT AAAGTTACTT CTTTTGGTAA GAGTAAACTT
CCTTATATTA CCAGTGCAGT TATTCAGGAA TTAACTGAGA GGTTCGGTAA AGATGCTGTT
CTGAAGGGAG GAATGCGCAT ACAAACTACT ATTGATATGA ACTTCCAAAA GATGGCAGAG
AAAACTGTAA GTGAATGGCA TAAAATCTTA TATTATCGTG GGCTTTATCG GAGTTGGGAC
AAAGGTCAAT TAGCATTAGT AGCAGTTGAC CCACGCACTC ATTTTGTCAA AGCGATGGTT
GGTGGGGCAG ATTTTAAAAC AAGTCAATAT AATCGCGCTG TTCAAGCTTT CAGGCAACCT
GGTTCTTCGT TTAAACCTTT TGTTTACTAT ACTGCTTTTG CTTCGGGTAG ATTTACCCCA
TCTTCAGTGG TTATAGATGC TCCTGTTAAT TATCGAGATG GTACCGGTTA TTATTCTCCT
CGAAATTATG GTGGCGGATA TTCTGGAGCA GTAAGTATTC GTAAGGCTTT ACAATCTTCT
CTGAACATAC CTGCTGTTAA AATTGGTCAG GTTGTAGGGC TTAATAAGGT GATTGAGGTT
TGTCGAATCT TGGGAATTAA AAGTCCCATG GAACCCGTGA TTTCTTTACC ATTGGGTTCT
GTTGACTTGA CACCTCTAGA AATGGCGGGT GCCTATGCCA CTTTTGCTAA TAATGGCTGG
CATTCTGATA CGACGTTTAT TGTCCAGGTG ACAGATACTA GTGGAAATGT CTTATTGGAC
AATACTCCTA AACCTAAATT GGTTCTCAAT CAGTGGGCTG TAGCATCACT TAATAGTATA
TTGGTGGGAG TAATTGAACA AGGTACGGCT ACTAGGGCGA GAATAAGTCG TCAAGCTGCT
GGAAAAACTG GTACGACTTC TTCAGAAAGG GATGTTTGGT TTGTTGGCTA TACTCCTCAG
TTGTCAACTG CCGTTTGGGT AGGTAACGAT GATTACCGAC CACTCAACTA TGGAGCTACT
GGTGGTACTA CTGTTGCACC TATCTGGCGT GATTTTATGA ATCAAGCCAT GAGTGGTATG
CGCAAAGAAT ATTTTCCTCC GGCATATAAG TTTGATAGGC CCTAG
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| Protein sequence | MKSIQGSEIK VSTNTLPNKQ TKKPLSKSAP VFEFVQSVGK VTTGTVLGIT MLTSSLVAGG
LVGLAISFRN LPDVRLLKNY TPSETTRIYD IKGRPLASLH DEANREVMPL KQISPDLKRA
VLAIEDSNFY NHLGIYPIGI MRALVANLER GKTVEGGSTV TMQLVKNLFL SPTAKLSRKV
AEAVLAIRME QIMAKDEILE LYLNQIYWGH NLYGVETAAR SYFNKSSEDL TLAEAALMAG
MIPAPEEYSP FINYKKSKQR QATVLARMRE LNWITAQEEA EALKQPLYVG KVTSFGKSKL
PYITSAVIQE LTERFGKDAV LKGGMRIQTT IDMNFQKMAE KTVSEWHKIL YYRGLYRSWD
KGQLALVAVD PRTHFVKAMV GGADFKTSQY NRAVQAFRQP GSSFKPFVYY TAFASGRFTP
SSVVIDAPVN YRDGTGYYSP RNYGGGYSGA VSIRKALQSS LNIPAVKIGQ VVGLNKVIEV
CRILGIKSPM EPVISLPLGS VDLTPLEMAG AYATFANNGW HSDTTFIVQV TDTSGNVLLD
NTPKPKLVLN QWAVASLNSI LVGVIEQGTA TRARISRQAA GKTGTTSSER DVWFVGYTPQ
LSTAVWVGND DYRPLNYGAT GGTTVAPIWR DFMNQAMSGM RKEYFPPAYK FDRP
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