| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0424 |
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| Symbol | |
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| ID | 4241929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 666287 |
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| End bp | 669340 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638105743 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_720357 |
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| Protein GI | 113474296 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.316008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.221114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAA TCTTAAAAAA AGCTACAGAA TCAATAGAAA TCAACCAAAA TTTGCAGCAA
GTGCGACAGC AGAAAAGATT AATGGTAATT GACACGAGAG TGGAAAATTA TCGCCAGTTA
ACTACAGGAG TTACTCCAGA AACAAAAGTA GCTTTAATTG ACCCTAAGCG TGATGGTATA
GAACAAATTA CCGAACTTTT ATCTAATTAC CCAACTAATA GTTTACATAT TGTTTGTCAC
GGCGACCCTG GCATTTTATA TTTGGGAAAA ACACCAATAA GCGAGCAGAA TCTTCCCAAA
TATACCGGAT ATCTCCAAGA ATGGGGAATT GTCGATATAT TACTCTATAG TTGTAATATT
GCCAGTCAAT CAGATAACTT GCTCCAACTT TTACATAAAT TCACTGGAGC CAATATTGCT
GCTTCAAAAC ATCAGGTGGG CAACCCATTA AAAGGGGGAA CTTGGGATTT AGAAAGCCGC
ATTGGTTCAG TTGCTTCAGA GATAGCTTTT TTACCACAAG TTATTCAAGA TTATCCTGGA
GTATTTCACG GGTTACAATT TTATGTCGGT CAAGATGAAA CAGGTAAAGT CAGAGCCTAT
CTTGGCAAAG ATGATAGGGT GAGTAACGCC TACACCAATA TATTTTCTGA TGACTATCTC
ACTTTAAGTC CAGTTGGGAT TTGGGATGAC CGGGAAATAG AAGAAAAAGA TACTGCCTTT
GACTATCGTT ATACTAATAA CGCATCCTAT TTTCCAGGCT TTACACCACA GATAGATATG
TTCTATGAAA CTCCTGTAGA CGGGAGTCCT GCTGATGATT CTTTCGATCG CGAACGCAAT
ACCTATTTCC AAGTCAACTT TCTAGATGAG CTGAAGGTAT GGAATGGTGA AGATTTTGTG
GCTACAGGTG GAGAGGTGAT GACCTGGTCT CAAGAAAACT GGGATGTTAA TGATAAAGGT
GAATGGTATG CAGAATTTGC CAATGAAGTC ACCACAGGGG AAGGTGTTGT AAAGGGAAAA
CCTTACTATT ATGCAGTATA TGACGAACCA GGTAATGACC ACTGGCATTA CGTCATGGAG
TTACAGGAAG GAACTTCACC TACAGGTATT GATGACGGGC TTTACTTGTT GCCAATTGAG
GTTGAGACTA ATATTCCTGA TAGCATTCCT TCCGATCCTG TTTATATTCT CTACAATCAA
AACCTCTCTG CTGCCCCCGA TGTAGACCAA GATACTATTC TGGCCGCTCA AAATTATCTG
CTAGAAGAGT ACGGAATGAC TGAACCTGCT CAAGAATTTA AAGCTTTCTT AGATAGCAGT
CAAAATGGAG TAGATTCAGA TGCTACAGGA CTTGCAACTT TTAGCCTGAA TGCAGAACAG
ACAGAAATAG AATATACCAT TGAATTAAAT GGACTTGACC TAATTGAAGA TCCTGTAAAG
CGTACAGCTG AGAACGCCAT TACCGAAATT CACTTTCACC ACCGCGGCTA CGGCACTGAT
GGCAGTCACG TTTTGAACGT CTTTGGGACA CCATCGGAAG ATGATGATAA CATTGAGATT
GATTACGAAA ATGAAAGGAT TATAGGTAAG TGGGATTGGT CTGATGCTGC TGCCAATTTT
GCTCGCCATT CTGAGCCTAA ATCTGATGGT GTTTATGGTG ACTGGAAAGC TCCTAAATTA
GAAATTGAAG TTGTTGAAGC CTACAATAAT GGTGCTTTAG GCATCAAATT GCGAGATGAA
GAACCTGAAG ATAAACTCAA CATTTTTGAG GGAACTCAGC TCAACTTTGA CAACGGTGCC
AGGGTTAAAA TAACAGAAAA CATTACCATA TCTAAGGCAA AAAGTAGTAT AGTTGAAGCA
AGCATTCTGG AAGGGGGCGA TATTCCAGCT GGGGAAATAG CCATTCTATC TCCTGCTCAA
ATGCCGGGAA CTACTCCCGT TACGACTTCT CTATTCAACT TATTTCATGG CAACCTCTAC
GTTCAGGTGC ATACCAACCA AAATCCTGAA CCTGGTGATA TTCGGGGCCA AGTATTACCT
GTGAGAACTT TAGCAGATGC CGAAGATGAT GTACTTTCTG GCGGTACAGG TAATGAATTA
TTTGAATTGG ATGCCGCTGA TGTAGGAGGT ATTGAGATTG AAGAATTGGC TGGTCGCGAA
ACTTTGACTC TTGAAGGTAT GGAAACTTCT ATGTCAAATT TGCATAGAGA AGATAACGAT
CTAATTATAG ATGTTAACCA AGATGGCAGT TTCCAAACAG CGGAAGACCT GACCCTCAAA
AACTTTTTTG CAGACGAAGT AGGAGTAGTT GGCAAAGGCT ATATTGAGTT AGTTGATGAG
ATTTCTGGTA ATGAAATTTT AAGAGGTGTT TCTTCTAGTG GGAAGGATTT AGTCCATGGA
ACTTCAGAAG ACGATATTCG GCAAGGTAAG GGGGGTAATG ATGTTATTTC TGGCTTTGGT
GGTAATGACG AACTCTATGG TAACCGGGGT GATGATCTTC TCAAAGGTGG TGATGGTAAC
GATATTCTCA AAGGTGGTTA TGAAAACGAT ACTTTAAAGG GGAATAGTGG TAATGATACC
TTAATTGGTT GGCAAGGTTT CGATATTTTG CTTGGTGGCA GTGGAGAAGA TAATCTGAAG
GGTGGTATCG GTCGCGATCG CCTGAATGGA GGAAAGGATG ACGATCTGCT CAGTGGTGGA
GCGAGTCAGG ATAAATTTAT CTTTGCTGCC AATAAAACAT TTAGTGAAGC AGATTTAGGT
GTGGATGAAA TTACTGATTT TGTATCTGGC CCAGATAAAA TTATCTTGGA TGTAACAGTG
TTCACTGCCA TTAAGACTAC TCCTGGAGAA AGTCTAGATG AAGGCGAATT TGCTGTGGTG
GATAATGAAA CTGATGTATT TAGCGCTGAT GCTACGATCG TTTATAACTC AGCCAATAGT
ACATTATATT ATAATCCTAA TGGAGTTGAA AATGGCTTGG GAGATGGGGG TAGCTTTGCC
CTGTTATCTA ATGAAGCATC TTTGAGTGCA GATGATTTCC TAGTCAGAGC TTGA
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| Protein sequence | MNSILKKATE SIEINQNLQQ VRQQKRLMVI DTRVENYRQL TTGVTPETKV ALIDPKRDGI
EQITELLSNY PTNSLHIVCH GDPGILYLGK TPISEQNLPK YTGYLQEWGI VDILLYSCNI
ASQSDNLLQL LHKFTGANIA ASKHQVGNPL KGGTWDLESR IGSVASEIAF LPQVIQDYPG
VFHGLQFYVG QDETGKVRAY LGKDDRVSNA YTNIFSDDYL TLSPVGIWDD REIEEKDTAF
DYRYTNNASY FPGFTPQIDM FYETPVDGSP ADDSFDRERN TYFQVNFLDE LKVWNGEDFV
ATGGEVMTWS QENWDVNDKG EWYAEFANEV TTGEGVVKGK PYYYAVYDEP GNDHWHYVME
LQEGTSPTGI DDGLYLLPIE VETNIPDSIP SDPVYILYNQ NLSAAPDVDQ DTILAAQNYL
LEEYGMTEPA QEFKAFLDSS QNGVDSDATG LATFSLNAEQ TEIEYTIELN GLDLIEDPVK
RTAENAITEI HFHHRGYGTD GSHVLNVFGT PSEDDDNIEI DYENERIIGK WDWSDAAANF
ARHSEPKSDG VYGDWKAPKL EIEVVEAYNN GALGIKLRDE EPEDKLNIFE GTQLNFDNGA
RVKITENITI SKAKSSIVEA SILEGGDIPA GEIAILSPAQ MPGTTPVTTS LFNLFHGNLY
VQVHTNQNPE PGDIRGQVLP VRTLADAEDD VLSGGTGNEL FELDAADVGG IEIEELAGRE
TLTLEGMETS MSNLHREDND LIIDVNQDGS FQTAEDLTLK NFFADEVGVV GKGYIELVDE
ISGNEILRGV SSSGKDLVHG TSEDDIRQGK GGNDVISGFG GNDELYGNRG DDLLKGGDGN
DILKGGYEND TLKGNSGNDT LIGWQGFDIL LGGSGEDNLK GGIGRDRLNG GKDDDLLSGG
ASQDKFIFAA NKTFSEADLG VDEITDFVSG PDKIILDVTV FTAIKTTPGE SLDEGEFAVV
DNETDVFSAD ATIVYNSANS TLYYNPNGVE NGLGDGGSFA LLSNEASLSA DDFLVRA
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