Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0407 |
Symbol | |
ID | 4241971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 638761 |
End bp | 639687 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105731 |
Product | nuclease (SNase-like) |
Protein accession | YP_720345 |
Protein GI | 113474284 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAG AAATTTTAAC CCTCGAAAAA AAAGGCACAA AAATCAAAAA TATCCAAGTA ACAAAAGTAG TTGATGGTGA TACAATTAAA GTCCTATTGA ATAATAAGCG AGAATTTATT AGGCTTGATT ATGTTGATGC GGAAGAAAGT TATTCTGAAT ATTCCAAACC TGTTACAGAA ATTGGAAAAC AAGCAGCAGA AATGGCAATA CAATACTTCA CATCACCTAA CGGTGAACTT GCCGAAGTTG ATATTGAATT TGATACAGAT GAACCGACAG AGAATTGTTT AGAAAAGTAT CGTGACCATC AAGGTCGCTT AATCGCTTAT GTACATAAAA ATGGTGAAAA CTTTAATGTT AAACTAATTA AAGAAGGATG GAGTCCCTAT TTTATTAAAT ATGGATATTC TCGATTATAT CATCAAGAAA TGATGGTAGC AGAAACAGAA GCTCAAGCAA ATAGTCTTGG TGTTTGGAGT TCTCAAATAA ATAAAGGAAA ACGCAAAAGG AATTATAATT TACTGGTACC TTGGTGGACA TTAAGAGCTT CCATTATAGA AAATTATCGT AGTTATGGAA TAGCTGCAGG AGTCCTAGAA GTTAGACTAG ATTTTCCGAA AATTTTAGCT GCAGCAAAGA TTGGAGAGTA TATTACAGTT TTCTTTGATT TACAGAATGG AGTTTCTAAG TGGTTAGATA ATGGTGCTTT AATTTACGAT GGAACGAAAG ATCATCGTTT AAAGTTATGG ATTCCAGATA CTAATAGTAG AGAAATGAAG CCATTATTAC AGCTGTTAAA AAATCGTTAT TTTGGTTTAT CTAGAGGATA TGTTTATATT AGTGGACAAG TAAATATGTA TCGGGATAAA CCAGAAATTA TCCTTTCTGA TATTAAACAA TTATCAGATT TTCCTCCTAC AGCTTGA
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Protein sequence | MKSEILTLEK KGTKIKNIQV TKVVDGDTIK VLLNNKREFI RLDYVDAEES YSEYSKPVTE IGKQAAEMAI QYFTSPNGEL AEVDIEFDTD EPTENCLEKY RDHQGRLIAY VHKNGENFNV KLIKEGWSPY FIKYGYSRLY HQEMMVAETE AQANSLGVWS SQINKGKRKR NYNLLVPWWT LRASIIENYR SYGIAAGVLE VRLDFPKILA AAKIGEYITV FFDLQNGVSK WLDNGALIYD GTKDHRLKLW IPDTNSREMK PLLQLLKNRY FGLSRGYVYI SGQVNMYRDK PEIILSDIKQ LSDFPPTA
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