Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0384 |
Symbol | |
ID | 4241618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 595539 |
End bp | 596810 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638105711 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_720325 |
Protein GI | 113474264 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTGGC CGCGTTCTTT ACAATTGTCT GAACAAGGGT TGGAAATTAT TAAAAATAAT ATTGCAAGAA TAAAAAAAAA TAATCCAAGT TGGAATGATT TAGATTGGCT TGAAAAAGCT ACTAATCACA TTGATAATAA AGCACGGGTT ACTTCTGTAT CAACATTGAA GCGATTTAAG AGCAAAAAGC CAATCGAAGT TAAAGGTTAC ATTGCCTTAT GCCAAGCTAT TGATATTGAT TGGAGAAAAG TAACTGATTG GAAGTCGTTG GGAATAGATC AATATGAGTT TGTCTCAAAT CCTTGGGAAA ATACATTACT TGAAAATGAA TATACTCTCA CAGGTCATGC AAATAGTGTT GGCAGTATAG CTCTGAGTCC AAATGGAAAC ACTCTTGCTA GCGGGAGTTA TGACGGAGAA ATAAAAATTT GGGATTTACA GAAACGAAAA GTGAAATGTT CATTAAAAGC TCATGAAAAA GATGTTTCAT GTCTTGTTTT CAGTTCAGAG GAAGAATTAA TTAGTGGCAG TTATGACGAA AAAATAAAAA TTTGGAATTT ACAGACGCAA GAAGTTAAAT GGACTTTGCA TCAAAAAGAA TTGGGGTCTA ATCCTTATGC TATTGAATCT ATGTCTCTGA GTCCAAATGG AGAGTATTTA TTTATTAATT CCTATGAGAG TGAGCAAATT AAGGTTTGGT CTTTGCCTAA AGAAATAAAA CAAGTAGGTT GTTTGTCTAA GCATAAAGAT GGAGTTATGT GTTTAGCTAT GAGCCCAAAT GGTGGCATGC TAGTTAGCGG GGGAAAAGAT GGCAAGGTTT ATTCTTGGGG AGTACCTTCT AAAGATAATC AACCTCATCA GTACTATGAA GATTGGATAT CTTTTCCAGA ATCAGAAAGT TTAGAACAAC ATTCAGATTG GGTAACTTCT CTAGCAATTA GTCCAAATAA TGAAGTTGTG GCTAGTGGAG GGAAAGATGG TGAGATTTAT CTTTGGAATC TCAATTCGGG AACTTTCATA AAAAAGTTAG AGAAACATTC AAAAGCAGTT CTTTCATTGG CTTTTAGTCC AGATAGTCAA ACTCTGGCTA GTGCTAGTTA CAGTCAGACT ATTAAGATTC ATAATTGGCG TGAAAGCAAT GTTATACAAA CTTTGGAGAC ATATCCAAAT TATACTCAGT GCCTTGTATT TAGTCAACAT TCTCAAAGAT TACTTAGTAG CAATAGCCAA GGAAATATTT GTACTTGGAA ACCTTCGAGT ATTAATCAGT AA
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Protein sequence | MGWPRSLQLS EQGLEIIKNN IARIKKNNPS WNDLDWLEKA TNHIDNKARV TSVSTLKRFK SKKPIEVKGY IALCQAIDID WRKVTDWKSL GIDQYEFVSN PWENTLLENE YTLTGHANSV GSIALSPNGN TLASGSYDGE IKIWDLQKRK VKCSLKAHEK DVSCLVFSSE EELISGSYDE KIKIWNLQTQ EVKWTLHQKE LGSNPYAIES MSLSPNGEYL FINSYESEQI KVWSLPKEIK QVGCLSKHKD GVMCLAMSPN GGMLVSGGKD GKVYSWGVPS KDNQPHQYYE DWISFPESES LEQHSDWVTS LAISPNNEVV ASGGKDGEIY LWNLNSGTFI KKLEKHSKAV LSLAFSPDSQ TLASASYSQT IKIHNWRESN VIQTLETYPN YTQCLVFSQH SQRLLSSNSQ GNICTWKPSS INQ
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