Gene Tery_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0384 
Symbol 
ID4241618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp595539 
End bp596810 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content34% 
IMG OID638105711 
ProductWD-40 repeat-containing protein 
Protein accessionYP_720325 
Protein GI113474264 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGGC CGCGTTCTTT ACAATTGTCT GAACAAGGGT TGGAAATTAT TAAAAATAAT 
ATTGCAAGAA TAAAAAAAAA TAATCCAAGT TGGAATGATT TAGATTGGCT TGAAAAAGCT
ACTAATCACA TTGATAATAA AGCACGGGTT ACTTCTGTAT CAACATTGAA GCGATTTAAG
AGCAAAAAGC CAATCGAAGT TAAAGGTTAC ATTGCCTTAT GCCAAGCTAT TGATATTGAT
TGGAGAAAAG TAACTGATTG GAAGTCGTTG GGAATAGATC AATATGAGTT TGTCTCAAAT
CCTTGGGAAA ATACATTACT TGAAAATGAA TATACTCTCA CAGGTCATGC AAATAGTGTT
GGCAGTATAG CTCTGAGTCC AAATGGAAAC ACTCTTGCTA GCGGGAGTTA TGACGGAGAA
ATAAAAATTT GGGATTTACA GAAACGAAAA GTGAAATGTT CATTAAAAGC TCATGAAAAA
GATGTTTCAT GTCTTGTTTT CAGTTCAGAG GAAGAATTAA TTAGTGGCAG TTATGACGAA
AAAATAAAAA TTTGGAATTT ACAGACGCAA GAAGTTAAAT GGACTTTGCA TCAAAAAGAA
TTGGGGTCTA ATCCTTATGC TATTGAATCT ATGTCTCTGA GTCCAAATGG AGAGTATTTA
TTTATTAATT CCTATGAGAG TGAGCAAATT AAGGTTTGGT CTTTGCCTAA AGAAATAAAA
CAAGTAGGTT GTTTGTCTAA GCATAAAGAT GGAGTTATGT GTTTAGCTAT GAGCCCAAAT
GGTGGCATGC TAGTTAGCGG GGGAAAAGAT GGCAAGGTTT ATTCTTGGGG AGTACCTTCT
AAAGATAATC AACCTCATCA GTACTATGAA GATTGGATAT CTTTTCCAGA ATCAGAAAGT
TTAGAACAAC ATTCAGATTG GGTAACTTCT CTAGCAATTA GTCCAAATAA TGAAGTTGTG
GCTAGTGGAG GGAAAGATGG TGAGATTTAT CTTTGGAATC TCAATTCGGG AACTTTCATA
AAAAAGTTAG AGAAACATTC AAAAGCAGTT CTTTCATTGG CTTTTAGTCC AGATAGTCAA
ACTCTGGCTA GTGCTAGTTA CAGTCAGACT ATTAAGATTC ATAATTGGCG TGAAAGCAAT
GTTATACAAA CTTTGGAGAC ATATCCAAAT TATACTCAGT GCCTTGTATT TAGTCAACAT
TCTCAAAGAT TACTTAGTAG CAATAGCCAA GGAAATATTT GTACTTGGAA ACCTTCGAGT
ATTAATCAGT AA
 
Protein sequence
MGWPRSLQLS EQGLEIIKNN IARIKKNNPS WNDLDWLEKA TNHIDNKARV TSVSTLKRFK 
SKKPIEVKGY IALCQAIDID WRKVTDWKSL GIDQYEFVSN PWENTLLENE YTLTGHANSV
GSIALSPNGN TLASGSYDGE IKIWDLQKRK VKCSLKAHEK DVSCLVFSSE EELISGSYDE
KIKIWNLQTQ EVKWTLHQKE LGSNPYAIES MSLSPNGEYL FINSYESEQI KVWSLPKEIK
QVGCLSKHKD GVMCLAMSPN GGMLVSGGKD GKVYSWGVPS KDNQPHQYYE DWISFPESES
LEQHSDWVTS LAISPNNEVV ASGGKDGEIY LWNLNSGTFI KKLEKHSKAV LSLAFSPDSQ
TLASASYSQT IKIHNWRESN VIQTLETYPN YTQCLVFSQH SQRLLSSNSQ GNICTWKPSS
INQ