Gene Tery_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0340 
SymbolmurQ 
ID4242516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp522487 
End bp523410 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content40% 
IMG OID638105671 
ProductN-acetylmuramic acid-6-phosphate etherase 
Protein accessionYP_720286 
Protein GI113474225 
COG category[R] General function prediction only 
COG ID[COG2103] Predicted sugar phosphate isomerase 
TIGRFAM ID[TIGR00274] N-acetylmuramic acid 6-phosphate etherase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TACAACAGCG AGGTCATTTG TTAACCGAAC AGGTTAACCC AAATAGTCAT 
AATCTCGACC AGTTAAGTTC TTTAGAATTA GTAGACTTGT TTAACCAAGA GGATAAGCAA
ACTTTGAAAG CGATCGCTTC ATCCCGTTTA CAACTAGCTC AGGCAGTAGA CATGACTACT
AAAGCTTTAA GTCAAGGTGG TAAATTGTTT TATGTGGGAG CAGGTACTAG TGGTCGTTTA
GGCGTATTAG ATGCCGCTGA ATGTCCACCA ACATTTTGCA CGTCTCCAGA GTTGGTACAA
GGAATTATTG CTGGAGGTGC AAATGCTTTA CTTCGCAGTT CCGAAGATTT GGAGGATAGC
TGGGAAGATG GTAATGAGGC GATCGCTTCG CACAATATCA CAAATCTAGA CGTAATAGTT
GGCATCACTG CAGGTGGTAC AACTCCTTAT GTTCACGGTG CTTTAGAAGG AGCAAAACAA
AGGGCAGCAA AAACAATTTT TATTACTTGT GTGCCTGTAG AACAATTTAG CATCAAGGTA
GATGTAGATA TTAGGTTGTT GGTTGGTCCG GAACTATTAT CAGGTTCAAC CCGTCTGAAG
GCAGGAACAG TCACAAAAAT GGCCTTAAAT ATCTTATCCA CCGGAGTAAT GGTGAGGTTA
GGAAAAGTTT ATGGTAATCG CATGATTGAT GTAGCTATAA AAAATAGTAA GTTACGGGAT
CGGGCCTTAC GAATTATTGA AGACTTAACC GAGTTAAGTC GGGATGAAGC AGAGGAATTA
TTGAATAAAA GTGGTGATTC AGTTAAGTTA GCACTTTTGA TGCACTGGAG TAACTTAAAA
AAAGAAGAAG GGGATAGGGT TTTATCTGAG TATCAAGGTA ATCTTAGAGC AGCCATGAAA
AACGTAAGTT TTTCTACTGA GTAG
 
Protein sequence
MKNLQQRGHL LTEQVNPNSH NLDQLSSLEL VDLFNQEDKQ TLKAIASSRL QLAQAVDMTT 
KALSQGGKLF YVGAGTSGRL GVLDAAECPP TFCTSPELVQ GIIAGGANAL LRSSEDLEDS
WEDGNEAIAS HNITNLDVIV GITAGGTTPY VHGALEGAKQ RAAKTIFITC VPVEQFSIKV
DVDIRLLVGP ELLSGSTRLK AGTVTKMALN ILSTGVMVRL GKVYGNRMID VAIKNSKLRD
RALRIIEDLT ELSRDEAEEL LNKSGDSVKL ALLMHWSNLK KEEGDRVLSE YQGNLRAAMK
NVSFSTE