Gene Tery_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0299 
Symbol 
ID4242154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp457720 
End bp459648 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content33% 
IMG OID638105636 
ProductABC transporter related 
Protein accessionYP_720251 
Protein GI113474190 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGT TCACACTTCA ATCAGTCAAA AAAGACTTTG GTATCAAAGA AATTTTAAAA 
GATGCCAGCT TCAGTTTAGA TCCTAAGGAC AAAGTTGGTT TAATTGGTAC AAATGGCTCA
GGAAAATCAA CTCTTTTAAA AATGATTGCT GGTTTAGAAC CCACAGATAG CGGTGAAATT
TTAGTTAATC AAAATGTGAG GATTATTTAT TTGCCTCAAC AACCAGATTT GAATGAAAAT
AATACTGTAT TAGAACAGGT TTTTGCCAAC AGTGGTAAAC AAACGGCACT GATAAAAGAG
TACCAAGAAC TATCAGAAAA ACTAGCTCAT TATCCAGAAG ATAGTCAGTT AATGGCGCGT
TTTTCACAGG TAACTCAAAA GATGAATTAT ACTAATGCTT GGGAATTAGA AACTAAGGCT
AAAATCATCT TGAGTAAATT AGGAATTCAA GATTTTGAGG TTAAAGTTGG TAATTTATCT
GGGGGTTATC GTAAACGAAT TGCTTTAGGG ACAGCCTTAC TTTCTGAACC TGATGTTTTG
TTAATGGATG AGCCAACAAA CCATCTAGAT GCTATGTCTG TAGAATGGTT ACAAAGTTAC
TTAAAGACTT TTTCTGGAGC AATTTTATTA ATTACTCACG ACCGTTATTT TCTTGACCGG
GTTACTAATA AAATTCTGGA AATAGACCGA GGAGATATTT ACACTTATTC TGGTAACTAT
TCCTACTATT TAGAAAAAAA AGCTTTAGCT GAAGAATCTA TCGTAAGTTC TCAAAAGAAG
CATAAAGGTC TATTACGTAG AGAATTAGAA TGGTTAAAAC GAGGACCAAA AGCTCGCAGC
ACTAAACAAA AAGCTCGAAT TCAACGCATA GAAGAAATGC AAGGAAGAGA ATTCAAAGAA
TCTTTAGGAA AGGTAGATAT TTCTACTGCT GGTCGTCGAA TTGGCAAAAA GGTTATTGAG
TTAGAAAATA TTTCTAAATC TTATAATGGT AGAACTATAA TTAAAGATTT TACTTATGAG
TTTATCCCAG AAGATAGAGT AGGAATTATT GGTAGTAATG GTATGGGAAA ATCAACCTTA
ATGGATATTA TTACAGGTAG GGTAAAACCT GATTATGGCA AAGTAGAAAT TGGGACAACA
ATACATATAG GTTATTTTGA CCAATATTCA GAAAACTTGC TGGATGCTGG GGCTGAAAAT
CAACGGGTTA TAGATTATAT AAAAGATGTG GCAGAATATG TTCAAACTGC AGATGGTACT
CAAATTAGTG CTTCTCAAAT GTTGGAAAGA TTTATGTTTC CAGGTAATCA ACAATATGCT
CCTATCTATA AACTTTCTGG TGGGGAAAAA AGACGATTAT TTCTGTTGAA AGTATTGATG
AGTGCTCCTA ATGTTTTGAT TTTGGATGAA CCAACTAATG ATTTGGATGT ACAAACTTTG
GCGGTGTTGG AAGAATATCT CGAAGAGTTT AATGGTTGTG TAATTGTGGT TTCTCATGAT
CGCTATTTTC TTGATAGAAC TGTAGATAGA ATTTTTGCTT TTGAAGGGGT AGGAAATTTA
CGACAATATC CAGGAAATTA TTCACTTTAT TTAGATTATA AAGAAGCAGA AGCAACAGCA
AAAAAATTTT CAGAAGTTGA GGAAAAGCTA AAAGAAAGTC AGCCTAAACA ACAAAAATCA
GAAAGAGTTT CTCGTGATCA AAGGGGGCAA AGAAAATTAT CATCAAAAGA GAAACGAGAA
TATGAGAACT TAGAGAAAAA AATTGCTCAG TTAGAAACTG AGAAAGCTGA AGCAGAAAAT
GAACTTTATA ATTCACCTCC AACAGAGGTT AGTGAAGTTC AAAAACTTCA TGAAAAGGTA
GAAGGTTTAG GACAAGAAAT TGATATTGCT ACAGAAAGAT GGTTAGAGTT AGCAGAGATA
GATTCTTAA
 
Protein sequence
MSMFTLQSVK KDFGIKEILK DASFSLDPKD KVGLIGTNGS GKSTLLKMIA GLEPTDSGEI 
LVNQNVRIIY LPQQPDLNEN NTVLEQVFAN SGKQTALIKE YQELSEKLAH YPEDSQLMAR
FSQVTQKMNY TNAWELETKA KIILSKLGIQ DFEVKVGNLS GGYRKRIALG TALLSEPDVL
LMDEPTNHLD AMSVEWLQSY LKTFSGAILL ITHDRYFLDR VTNKILEIDR GDIYTYSGNY
SYYLEKKALA EESIVSSQKK HKGLLRRELE WLKRGPKARS TKQKARIQRI EEMQGREFKE
SLGKVDISTA GRRIGKKVIE LENISKSYNG RTIIKDFTYE FIPEDRVGII GSNGMGKSTL
MDIITGRVKP DYGKVEIGTT IHIGYFDQYS ENLLDAGAEN QRVIDYIKDV AEYVQTADGT
QISASQMLER FMFPGNQQYA PIYKLSGGEK RRLFLLKVLM SAPNVLILDE PTNDLDVQTL
AVLEEYLEEF NGCVIVVSHD RYFLDRTVDR IFAFEGVGNL RQYPGNYSLY LDYKEAEATA
KKFSEVEEKL KESQPKQQKS ERVSRDQRGQ RKLSSKEKRE YENLEKKIAQ LETEKAEAEN
ELYNSPPTEV SEVQKLHEKV EGLGQEIDIA TERWLELAEI DS