Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0205 |
Symbol | |
ID | 4242211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 310956 |
End bp | 311729 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638105550 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_720167 |
Protein GI | 113474106 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.76225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.242071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCTG TTGAAAATAA GATAGTTTTA ATTACAGGTG CTAGTAGTGG TATTGGTGAA TCTTGTGCCC AGATATTTGC TCAATCAGGA GCTCAACTAA TTTTGCTGGC TCGTCGCCAA GAAAAACTAG AAAAACTTGC TGAAGTACTA ACTAAGAAAT ACCAAACTAA GGTTTATTTA TTAAACTTAG ATATACGCGA TCGCCTAGCA GTTGAATCAG CCATAAATTC TTTACCCGAA CCTTGGAAAA AGATTGATAT TTTGATTAAT AATGCTGGTT TAAGTAGGGG TTTAAATAAA CTCCATATTG GCGATTTCAA GGATTGGGAA GAAATGATTG ATACTAATGT TAAAGGATTA CTCTATATTA CTCGTTATAT AGTGCCAGAA ATGGTCAGTC GAGGTCGGGG TCATGTAGTT AATATTGGTT CTATTGCTGG TCGTGGAGCA TATCCTAAAG GTAATGTTTA TTGTGCTTCT AAAGCTGCTG TTAGGGCAAT TTCTGAGGGT TTAAAACAGG ATTTATTAGG AACTCCCATC CGAGTAACTG AAATTCAACC AGGTTTAGTA GAAACAAAAT TTAGTGAAGT TAGATTTCAT GGAGATACAG AAAAAGCTAA GAATGTTTAC AAAAACTTGA TGCCTTTGAC AGGAGATGAT ATAGCAGATT TAGTACTTTT CTGTGTGACG CGATCGCCTC ACGTCAATAT TAGTGAACTT TTAGTAGTCC CCACAGATCA AGCTAATGCA ACAATGGTTC ATCGACATCA ATAA
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Protein sequence | MISVENKIVL ITGASSGIGE SCAQIFAQSG AQLILLARRQ EKLEKLAEVL TKKYQTKVYL LNLDIRDRLA VESAINSLPE PWKKIDILIN NAGLSRGLNK LHIGDFKDWE EMIDTNVKGL LYITRYIVPE MVSRGRGHVV NIGSIAGRGA YPKGNVYCAS KAAVRAISEG LKQDLLGTPI RVTEIQPGLV ETKFSEVRFH GDTEKAKNVY KNLMPLTGDD IADLVLFCVT RSPHVNISEL LVVPTDQANA TMVHRHQ
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