Gene Tery_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0205 
Symbol 
ID4242211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp310956 
End bp311729 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content36% 
IMG OID638105550 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_720167 
Protein GI113474106 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.76225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.242071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCTG TTGAAAATAA GATAGTTTTA ATTACAGGTG CTAGTAGTGG TATTGGTGAA 
TCTTGTGCCC AGATATTTGC TCAATCAGGA GCTCAACTAA TTTTGCTGGC TCGTCGCCAA
GAAAAACTAG AAAAACTTGC TGAAGTACTA ACTAAGAAAT ACCAAACTAA GGTTTATTTA
TTAAACTTAG ATATACGCGA TCGCCTAGCA GTTGAATCAG CCATAAATTC TTTACCCGAA
CCTTGGAAAA AGATTGATAT TTTGATTAAT AATGCTGGTT TAAGTAGGGG TTTAAATAAA
CTCCATATTG GCGATTTCAA GGATTGGGAA GAAATGATTG ATACTAATGT TAAAGGATTA
CTCTATATTA CTCGTTATAT AGTGCCAGAA ATGGTCAGTC GAGGTCGGGG TCATGTAGTT
AATATTGGTT CTATTGCTGG TCGTGGAGCA TATCCTAAAG GTAATGTTTA TTGTGCTTCT
AAAGCTGCTG TTAGGGCAAT TTCTGAGGGT TTAAAACAGG ATTTATTAGG AACTCCCATC
CGAGTAACTG AAATTCAACC AGGTTTAGTA GAAACAAAAT TTAGTGAAGT TAGATTTCAT
GGAGATACAG AAAAAGCTAA GAATGTTTAC AAAAACTTGA TGCCTTTGAC AGGAGATGAT
ATAGCAGATT TAGTACTTTT CTGTGTGACG CGATCGCCTC ACGTCAATAT TAGTGAACTT
TTAGTAGTCC CCACAGATCA AGCTAATGCA ACAATGGTTC ATCGACATCA ATAA
 
Protein sequence
MISVENKIVL ITGASSGIGE SCAQIFAQSG AQLILLARRQ EKLEKLAEVL TKKYQTKVYL 
LNLDIRDRLA VESAINSLPE PWKKIDILIN NAGLSRGLNK LHIGDFKDWE EMIDTNVKGL
LYITRYIVPE MVSRGRGHVV NIGSIAGRGA YPKGNVYCAS KAAVRAISEG LKQDLLGTPI
RVTEIQPGLV ETKFSEVRFH GDTEKAKNVY KNLMPLTGDD IADLVLFCVT RSPHVNISEL
LVVPTDQANA TMVHRHQ