Gene Tery_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0184 
Symbol 
ID4242935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp272764 
End bp274590 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content39% 
IMG OID638105530 
ProductWD-40 repeat-containing serine/threonin protein kinase 
Protein accessionYP_720148 
Protein GI113474087 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0231807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.531865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACT GCTATAATCC TACTTGCAAA AAACCTGAAA ATCCTGATCA AAATAAATTC 
TGCCAAAGTT GTGGTTCAAA ACTAATTTTG AGAGAACATT ATCGCCTCCT CAAACCAATC
GGAATGGGCA CATTTAGTAG AACATTTTTA GCAGTTGATG AAGATATTCC CTCAAAATCA
GTATCTGTAA TTAAACAATT TCTACCAATA GCTACTCCCG GTAAAAATGC AGAACAAAAT
ATTAATGAAA TAGAAAAAGC ATCAATATCA TTTCATAGAG AAGCTTTACA ATTAGATAAA
CTCGGAAAAC ACCCTCAAAT TCCTAGTTTA TTAGCCTACT TTTTTGTCTC GTCTTATAAA
TACTTAGTCC AAGAATATAT ACAAGGAAAA AACTTAGCTC AAGAGTTAAA AGAACAGGGC
ACATTTGATG AACAAAAAAT TAGAAAGTTT CTCAAAGAAA TACTGCCAGT CTTACAATTT
ATACATAAAA ATCAAGTCAT TCATCGCGAT ATTAAACCAG AAAATATTAT TCGTCGTGGC
GCTGATAAAA CAGGATATGG CTGGGGGGAT AATTTATGTT TAGTTGGTTT TGGTTCTGCT
AAAGCTATTT CCATTCACCC CACAGTCAAA ACTGATACTA TTATTGGCTC CCCAGAATAT
ACAGCTCCAG AACAATTAAT GGGTAAACCA GTATTTGCTA GTGATATCTA CAGTCTGGGT
ATTGTTTGTA TTCAGTTAAT GACTCAATTA AACCCTTTTG ACTTGCGTTA CGGTGAGGAG
TTTTTATGGC AACAACATTT ACCTAGACCG GTGAGTAAGT CTTTGAGTAA TATCATTAAT
AAAATGTTGC AAGTTTCCTT GTCGGAACGT TATCACTCTA TAGAAGAGGT TCTGAAAGAT
TTAATGCAAA CACTGGTAAG TTCTTGGGCA GGTTTGGAAA GGTTCGAAAG TTATGGTCAT
AAAGTCAGAA CTTTAGCTTT TGGTATTGAT GGTCAAACTG TGGTGAGTGG GGGTGAAGAT
AATAATATTA AGGTATGGAC TTTGGGAACT GGGAACGAGC CTCAGACTTT AGGAGGTTGG
ATGTTTAGTC ATTCCGGATG GGTGCAGGCG ATCGTTTTTA GTCCGGATGG TCAGACTTTG
ATAAGTGGCA GTAATGATGG TACCCTAAAA ATTTGGAATT TGGGTACTGG AAAGTTGGTG
CGTACTTTGA AAGGTTGGTT TGGTCAAGAG TGGGGTGCTG TGCATGCGAT CGCTATTAGC
CAAGATGGTC AGATATTGGC AAGCGGTCAT AATGACAAGA CGGTAAAGGT TTGGTATCTC
GCCAGTGGGA AAATGCGAGG GTTTTTGCAA GGTCATACTG CATGGGTTGA GTCTCTTGCT
ATTAGTCTTG ATGGTAAGGT CTTGGCAAGT GGCAGTGGAG ATAAGATGAT TAAATTATGG
GATGTTCAGA CAGGAAAGTT GTTGTTCAAT TTGACTGGTC ATAGTGATGT AGTTCGGAGT
GTGGCGATCG CTCCCGATGG TCAGATATTA GCTAGTGGCA GTAGTGACCA TACTGTGAGG
TTGTGGCAGT TAGGCACGGG AAATTTGTTG GGAGTATTAC AGCATCCTGA TGCTGTGAAT
AGTGTGGCTA TCAGTTCTGA TGGTTTGATT TTGGCAAGTG GCTGTCGGGA TGGGAATTTA
TATTTATGGA ATCCTTATAC AATGGAGAAA GTAGGACTAT TGAGTAAAGA TACGACAGTC
AATACGGTGA CTTTTAGTAT GGATGGTCAT CTGTTGGCAG CGAGTTGTGG GGATGGAAGT
TTGAGTGTTT GGCACAAGGT GAGTTAG
 
Protein sequence
MSYCYNPTCK KPENPDQNKF CQSCGSKLIL REHYRLLKPI GMGTFSRTFL AVDEDIPSKS 
VSVIKQFLPI ATPGKNAEQN INEIEKASIS FHREALQLDK LGKHPQIPSL LAYFFVSSYK
YLVQEYIQGK NLAQELKEQG TFDEQKIRKF LKEILPVLQF IHKNQVIHRD IKPENIIRRG
ADKTGYGWGD NLCLVGFGSA KAISIHPTVK TDTIIGSPEY TAPEQLMGKP VFASDIYSLG
IVCIQLMTQL NPFDLRYGEE FLWQQHLPRP VSKSLSNIIN KMLQVSLSER YHSIEEVLKD
LMQTLVSSWA GLERFESYGH KVRTLAFGID GQTVVSGGED NNIKVWTLGT GNEPQTLGGW
MFSHSGWVQA IVFSPDGQTL ISGSNDGTLK IWNLGTGKLV RTLKGWFGQE WGAVHAIAIS
QDGQILASGH NDKTVKVWYL ASGKMRGFLQ GHTAWVESLA ISLDGKVLAS GSGDKMIKLW
DVQTGKLLFN LTGHSDVVRS VAIAPDGQIL ASGSSDHTVR LWQLGTGNLL GVLQHPDAVN
SVAISSDGLI LASGCRDGNL YLWNPYTMEK VGLLSKDTTV NTVTFSMDGH LLAASCGDGS
LSVWHKVS