Gene Tery_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0054 
Symbol 
ID4242437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp76285 
End bp76875 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content32% 
IMG OID638105422 
Productsignal transduction protein 
Protein accessionYP_720041 
Protein GI113473980 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.888288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTC AAGCAGATCC AAACCTAAAT ATTTCTAAGA CTGGATTAGA AGCAAATTTT 
TTTATTCTAG AAAAACGATC TTTCAAGAAT AGACCTGATT TACTTCCAGA AAGTTCAGAA
AATAATTTAC CTAATGAAAA GCCTTTTGAG ACTCTTTATG ACGCATTTGA GAGATATAAG
CGTTTAGTAC TTTTGGGAGA ACCGGGAGCT GGAAAAACAG TAGCTTTACA AGAATTTAAG
AAAAATATAT CTAAGAAAGA GAGACAGGCA GAAAATAATA GCCTGGTTAT ATTTGTATCC
ATTCAAAAAT GGAAGTACCC AGCAGATATT GTTACGTTTT TAGCTAAAGA GATTGGTAAA
ATAGAGGAGG ATTTCCGGAA AGAAATACAA ACAAAAAGAC TTTTATTACT TTTGGATGGA
TTAGATGAGT TACCTTCTAA TGTGTCAAAA AGGTCAGAAA GCAGAGATGC AGAAATCATA
GACTATCGCG TTCATTTTCT CTCGAAGTTA TCAGATTTTT TAAGAAATTT AAATCCCAAT
AATATTTCAA TTGTGATGAC TTGTCGTAAC GGGACTTTAG TGAAAAAATA G
 
Protein sequence
MVTQADPNLN ISKTGLEANF FILEKRSFKN RPDLLPESSE NNLPNEKPFE TLYDAFERYK 
RLVLLGEPGA GKTVALQEFK KNISKKERQA ENNSLVIFVS IQKWKYPADI VTFLAKEIGK
IEEDFRKEIQ TKRLLLLLDG LDELPSNVSK RSESRDAEII DYRVHFLSKL SDFLRNLNPN
NISIVMTCRN GTLVKK