Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0021 |
Symbol | |
ID | 4241828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 33065 |
End bp | 35353 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638105399 |
Product | FHA modulated glycosyl transferase/transpeptidase |
Protein accession | YP_720018 |
Protein GI | 113473957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.61335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATT CTCAGCCTCT TCGTAATTCT CAAACTATTT TGGGTAATAT TACCCAGATG ATAAAAACTA TTCATGCTAG TGTCAACTTT TCTAGACTAG CAATTAGACC TAATGCTAGA GTACCTGAAC TATGGATAGA GGAAGGAAAA GCTACTCCAA CTAAAAAATA TCCTCTTTTG GGTGATCGTT ATTTGCTCGG ACGCTCCTCC CAAGCTTGTG ACATTGTTAT TCGTAATCAC CTAATTAGTA AGATTCATTT ATCTATCTCA CGAAACTCAA ATAAGGCTGA CGCCCCTTAT ATAATAAAAG ATGAAAACTC TCGTAATGGT CTCTACAATG GCAAAAAAAA GATTTATAGT CTGATTTTAC GTCATGGTGA TATATTAACT CTAGGACCAC CTGCATTAGC TGATACTGTT AAAGTTCGGT ATATTTATCC TCCTGCGTGG TATACTCAAG CCTTTCGTTA TAGTTTACTT GGTATTTCTG GATTCACTGC TTTAGTGAGT TTAATTATTC TACTTGAATG GACAAAATTT CAGGTATACC CTCTACCTAA TCCAATTACA GGCCCAGTAG TTATCTATGC TCGTGATGGA CAAACACCTC TACGTCCAGT TTATACAAAC TCCCATTATG AATTGGGGCG GATATCTAAA TTTTCTAAAT ATTTACCAGA CGCAGTCATT GCTTCTGAGG ATAGTCGCTT TTATTGGCAT ATCGGTATAG ACCCTATTGG AGTTGTCAGG GCAATATTGA CAAATTTACG TTCAGATGGT AGACGCGAAG GAGGTAGTAC AGTTACTCAG CAGCTAGCAA GAAGTATATT TCGAGATTAT GTAGGCACCG AAGACTCTGC CAGCAGGAAA ATACGAGAAG CGATAGCGGC ATTAAAATTA GAAACTTTTT ATAGTAAAGA TGATTTATTA TTAGCTTATC TAAATAAAGT CTATTTAGGA TTAGATTTAT ACGGATTTGA AGATGCTGCA AGATTTTATT TTGGTAAAAG CGCTCAAAAC CTAACTTTAT CAGAAGCAGC AACATTAGTA GGAATATTAC CAGCACCTAA TATTTTTAAT CCAGTACAAA ATTATCAAAT AGCTATAGAA AAAAGAGATG GGGTTCTTTA TCGAATGCTT AGTTTAGGTA TGATAGACCA ACAGGAAGCA GATAGAGCTA GGCGATCACT CATAGAAATT AATCCGAAAG CTATAGAAAT TATCCAAAGT ACAATAGCAC CTTATTATTA TAGTCATGTC TTTAGTGAAC TAGAAAATTT ACTAGGAGAA GACCTAGCTA AAGAAGGAAA TTTTATTGTT CAAACGGCTT TAAACCCTGA AATTCAAAGC TATGCAGAAA GAACTTTGCA AGATACAATT AATCAAGTTG GTTCTTATGC TAGCTTTTCT CAAGGAGCTA TAGTTACAAT AGATTCAAGA AATGGAGAAG TCATAACTCT GATTGGAGGT GTAGACTACA AAAAAAGTCA GTTTAATCGA GCTACTCAAG CACAACGTCA ACCAGGTTCT ACTTTTAAAG TCTTTGCTTA TGCCGCTGCT ATAGAAAAGG GTATACCACC AAAAAAATTA TATTCTTGTA GTTCCTTTGG GTGGATGGGT CAAACTTATG AAGGTTGTCA ACGGAGTAGT GGTAATAGAA ATATGTATGA TGGCTTGGCA CTTTCTGAGA ATGTGGTAGC TTTGCGGGTC GCTCAACAGG TAGGTTTGGA TAGAGTGGTA AAAATGGCAA AGGGTTTAGG AATTAAGTCT CAGTTAAGTG CTGTACCTGG ATTGATTTTG GGTCAAAGTG AAGTTAATGT TTTGGAAATG ACTGGTGCTT ATGGGGTATT TGCTAATGGT GGAGTGGCCA ATAAACCCCA TACTATTAGA AAGATTATAG ATAGTAGTGA TTGTCGCGAT CGCAATAATA TTTACACTTG TCGCTGTATT TATTCATACA TACCAGACAC AAATTGTGAA AACCCCAAAG GAGATATTCA AGCAAACCAA TCTATTATAC AACCATATAT AGCAAGTATT ATGACTCAAA TGCTCCAAGA TGTTATAAGG CATGGTACAG GTCGTAGTGC TAATTTGGGA TGGGGAGAAG CAGGTAAAAC TGGTACAACT AACCAAGGAA TAGATATATG GTTTATTGGA TATATTCCTA ACGAAAGTAT GGTTACAGGG ATTTGGCTAG GAAATGATGA TAACTCTCCT ACTTATGGTA GTAGTGAACA AGCCGCACAG TTATGGGGAA ATTATATGAA AAAGGTTGTG AATAAGTAA
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Protein sequence | MNYSQPLRNS QTILGNITQM IKTIHASVNF SRLAIRPNAR VPELWIEEGK ATPTKKYPLL GDRYLLGRSS QACDIVIRNH LISKIHLSIS RNSNKADAPY IIKDENSRNG LYNGKKKIYS LILRHGDILT LGPPALADTV KVRYIYPPAW YTQAFRYSLL GISGFTALVS LIILLEWTKF QVYPLPNPIT GPVVIYARDG QTPLRPVYTN SHYELGRISK FSKYLPDAVI ASEDSRFYWH IGIDPIGVVR AILTNLRSDG RREGGSTVTQ QLARSIFRDY VGTEDSASRK IREAIAALKL ETFYSKDDLL LAYLNKVYLG LDLYGFEDAA RFYFGKSAQN LTLSEAATLV GILPAPNIFN PVQNYQIAIE KRDGVLYRML SLGMIDQQEA DRARRSLIEI NPKAIEIIQS TIAPYYYSHV FSELENLLGE DLAKEGNFIV QTALNPEIQS YAERTLQDTI NQVGSYASFS QGAIVTIDSR NGEVITLIGG VDYKKSQFNR ATQAQRQPGS TFKVFAYAAA IEKGIPPKKL YSCSSFGWMG QTYEGCQRSS GNRNMYDGLA LSENVVALRV AQQVGLDRVV KMAKGLGIKS QLSAVPGLIL GQSEVNVLEM TGAYGVFANG GVANKPHTIR KIIDSSDCRD RNNIYTCRCI YSYIPDTNCE NPKGDIQANQ SIIQPYIASI MTQMLQDVIR HGTGRSANLG WGEAGKTGTT NQGIDIWFIG YIPNESMVTG IWLGNDDNSP TYGSSEQAAQ LWGNYMKKVV NK
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