Gene Tcur_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcur_3197 
Symbol 
ID8604543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermomonospora curvata DSM 43183 
KingdomBacteria 
Replicon accessionNC_013510 
Strand
Start bp3698385 
End bp3699542 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase, sigma 70 subunit, RpoD subfamily 
Protein accessionYP_003300776 
Protein GI269127406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.119315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCCTT CGGTGCTGCC AAGCCAAGCG CCATCGGTTG ACCAGGTGGC GGACCTTGTC 
GTGCGTGGGA GAGAGCACGG CGGCGTGACC GTCGACGACG TCGCCGCCGC GATCGACCGT
TCCGAGCTGC CGGCGGACTC GCTGGAGCGG GTCGTCCTGG CGCTCGCCGA ACAAGGAGTG
GAGGTCCTGG AGTCTCCCGG CGAGACCGGG GAGCTTTCCC GAGCCGACGA GGACGACCTC
GGCAAACGGG TGCCGACCAG CGACCTGGTC CGCATCTACC TGCGGGAGAT CGGGCGCGTG
CCGCTGCTGA CGGCGGAAGA GGAAGTCGAA CTCGCCAAAA CGATAGAGGC GGGCCTGTTC
GCCGAGGAGA AGCTGGCCCG GGCGGCCTTC ATCTCCCCCA GGGAACGGCT CGACCTCGAA
CTCATCGCGC GTGAGGGGGC GCGCGCGAAA CAACGCCTCA TCGAGGCCAA CCTGCGCCTG
GTGGTCTCGA TCGCCAAACG CTACGTGGGG CGGGGAATGC TGTTCCTCGA CCTCATCCAG
GAGGGGAATC TCGGCCTCAT CCGCGCGGTC GAGAAATTCG ACTACACCAA AGGCTTCAAG
TTCTCCACCT ACGCCACCTG GTGGATCCGC CAGGCGATCA CCCGGGCGAT CGCCGACCAG
GCCCGGACCA TCCGGATCCC GGTGCACATG GTGGAGACCA TCAACAAGCT GGTGCGGGTG
CAGCGGCAGC TGCACCAGGA CCTGGGCAGG GAGCCGACGC CCGCGGAGAT CGGCGCCGAG
ATGGGGCTGC CGGCCGAGCG GGTCGTGGAG ATCCAGCGCA TCGCGCAGGA ACCGGTGTCC
CTGCAGTCCC CCATCGGCGA GGAGGACTCC GACCTCGGCG ACTTCATCGA GGACGCCGAC
GCCGTGGTCC CGCTGGAGGC CGCCGCGTTC ATCCTGCTGC AGGACCAGCT GGAGGACATC
TTGTGCACGC TGTCGGAGCG GGAGCAGCGC ATCATCCAGT TGCGCTTCGG CCTGACCGAC
GGCCACCCCC GCACCCTGGA GGAGGTCGGA CGCGAGTTCG GGGTGACCCG CGAGCGCATC
CGCCAGATCG AGTCCAAGAC GCTGGCCAAG CTCCGCCACC CCTCCCGCGC GCAGATGCTG
CGCGAGTATC TGGAATAG
 
Protein sequence
MGPSVLPSQA PSVDQVADLV VRGREHGGVT VDDVAAAIDR SELPADSLER VVLALAEQGV 
EVLESPGETG ELSRADEDDL GKRVPTSDLV RIYLREIGRV PLLTAEEEVE LAKTIEAGLF
AEEKLARAAF ISPRERLDLE LIAREGARAK QRLIEANLRL VVSIAKRYVG RGMLFLDLIQ
EGNLGLIRAV EKFDYTKGFK FSTYATWWIR QAITRAIADQ ARTIRIPVHM VETINKLVRV
QRQLHQDLGR EPTPAEIGAE MGLPAERVVE IQRIAQEPVS LQSPIGEEDS DLGDFIEDAD
AVVPLEAAAF ILLQDQLEDI LCTLSEREQR IIQLRFGLTD GHPRTLEEVG REFGVTRERI
RQIESKTLAK LRHPSRAQML REYLE