| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3167 |
|---|
| Symbol | |
|---|
| ID | 8604512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 3664656 |
|---|
| End bp | 3666266 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_003300746 |
|---|
| Protein GI | 269127376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0572213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCACC AGACTCTGGC CATCGTGCTG TTCCTGGCGT TCGTGGGCGC CACGCTGGCG
ATCACCGTGT GGGCCAGCCG GCACACCAAG GACGCCACCG ACTTCTACGC CGGCGGGCGC
TCCTTCTCCG GCGTGCAAAA CGGCCTGGCG ATCGGCGGCG ACTACATGTC GGCCGCCTCC
TTCCTGGGCA TCGCCGGGAT GATCGCCCTG TACGGTTACG ACGGTTTCCT GTACTCCATC
GGCTTCCTGG TGGCCTGGCT GGTGGCGCTG CTGCTGGTCG CCGAGCTGAT GCGCAACTCC
GGCAAGTTCA CCATGGCCGA TGTGCTGGCG TTCCGGATGA GCCCGCGGCC GGTGCGCACC
GCCGCCGGAG TCTCCACCAT CACCGTCTCG ATCTTCTACC TGCTGGCCCA GATGGTCGGC
GCGGGCGCGC TGGTGGCGCT GCTGTTCGGC TTCACCTCCG AGTTCGCCAA GGGCGCCACC
ATCGTGCTGG TCGGCGCGCT GATGATCATC TACGTGGTGG TCGGCGGCAT GAAGGGCACC
ACCTGGGTGC AGATCGTCAA GGCCGTGCTG CTGATGGGCG GGGCGACGCT GGTCACGCTG
CTGGTGCTGG CCAAGTTCGG CTTCAACCTC TCCACCCTGC TGGGCGACGC CGCCGAGCAG
AGCGGCAAGG GCGAGGCGTT CTTGGAGCCG GGGCTGCGGT ACGCCACCGA CGCCCAGGGC
CTGGCCGGCA AGCTCGACCT GATCAGCCTG GGGCTGGCGC TGGTGCTGGG CACCGCGGGC
CTGCCGCACA TCCTGATCCG CTTCTACACC GTGCCCACCG CCCAGGACGC CCGCAAGTCG
GTGCTGTGGG GCATCGGCAT CATCGGCGTC TTCTACCTGC TGACGCTGGT GCTGGGCTTC
GGCGCGGCGG CGCTGGTGGG CAGCGAGGCG ATCCGCGAGG CCAACCCGGC GGGCAACACC
GCCGCCCCGC AGCTGGCCGA ACGGATCGGG CAGCTGATGC TCGGCGACGT GGGCGGCACG
GTGCTGCTGG CGATCATCGC GGCGGTGGCG TTCGCGACCA TCCTGGCGGT GGTGGCCGGC
CTCACCCTGG CCTCCTCGTC CTCCTTCGCC CACGACCTGT ATGCGCACGT GTTCCGGCGC
GGCAAGGCCA CCGAGAAGGA GGAGGTGCGG GTCGCCCGGA TCTCGGCCCT GGTGATCGGC
GCGGTCTCGA TCGTGCTGGG CATCTACGCC CAGCGGCTGA ACGTGGCGTT CCTGGTGGCG
CTGGCGTTCG CGGTCGCCGC CTCCGGGAAC CTGCCGGCGA TCCTCTACAG CCTGTTCTGG
AAGCGCTTCA ACACCGCCGG CGCGGTGTCG GCCATCTACG GCGGGCTGGG CGCCGCGGTG
CTGCTGGTGA TCTTCTCCCC GGTGGTCTCC GGCTCGGAGA AGGCCCTGTT CACCGGCGCC
GACTTCGCCT TCTTCCCGCT GGAGAACCCC GGCATCGTCT CCATCCCGTT CGGCTTCCTG
TGCGGCTGGC TGGGCACTGT GCTGTCCAAG GAGCACAACG CCGCCAAGTA CGCCGAGATC
GAGGTCCGCT CGCTGACCGG GGCCGGCGCC GAGAAGGCGG TCACCCACTG A
|
|---|
| Protein sequence | MSHQTLAIVL FLAFVGATLA ITVWASRHTK DATDFYAGGR SFSGVQNGLA IGGDYMSAAS
FLGIAGMIAL YGYDGFLYSI GFLVAWLVAL LLVAELMRNS GKFTMADVLA FRMSPRPVRT
AAGVSTITVS IFYLLAQMVG AGALVALLFG FTSEFAKGAT IVLVGALMII YVVVGGMKGT
TWVQIVKAVL LMGGATLVTL LVLAKFGFNL STLLGDAAEQ SGKGEAFLEP GLRYATDAQG
LAGKLDLISL GLALVLGTAG LPHILIRFYT VPTAQDARKS VLWGIGIIGV FYLLTLVLGF
GAAALVGSEA IREANPAGNT AAPQLAERIG QLMLGDVGGT VLLAIIAAVA FATILAVVAG
LTLASSSSFA HDLYAHVFRR GKATEKEEVR VARISALVIG AVSIVLGIYA QRLNVAFLVA
LAFAVAASGN LPAILYSLFW KRFNTAGAVS AIYGGLGAAV LLVIFSPVVS GSEKALFTGA
DFAFFPLENP GIVSIPFGFL CGWLGTVLSK EHNAAKYAEI EVRSLTGAGA EKAVTH
|
|---|
| |