| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2195 |
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| Symbol | trmE |
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| ID | 3762117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2421843 |
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| End bp | 2423270 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637786944 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_392457 |
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| Protein GI | 78486532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAAAC GCCCTTTTCA GGGCGTTTTG CGTTTTCACC AGGCATTTAA ATTCACCGAA
AGGATTCTGA AATTGGATTT CTCAACAAAC GACACCATTG CAGCAATCGC TACCGCACCC
GGCCGCGGAG GTGTGGGGAT CGTCCGTGTT TCAGGAATCA AAGCCGCCGA GATCGCTGAA
CACGTCTTGG GCAAATGCCC CAAACCGCGT TACGCTCATT ATGGTCCGTT TTTAGGCGCG
GAAGGTCAGG TTTTGGATCA AGGGATTGCG CTGTTTTTCC CGAACCCGCA TTCCTTTACC
GGGGAAAATG TGCTGGAATT ACAAGGGCAT GGCGGTCCGG TTATTTTGCA ATGGCTGTTG
GAACGAGTGG TGCAGTTAGG AGCCCGTTTA GCGGAGCCGG GTGAGTTTTC CAAGCAAGCC
TTTTTGAATG ATAAGCTCGA TTTGGCGCAA GCCGAAGCCA TTGCCGATTT AATTGATGCC
AGCTCACAGC AAGCGGCGAG ATCAGCATTA AGATCCCTGC AAGGTGATTT CTCAAACCAG
GTGAATGAAC TGGTAGAGCA ACTGATTCAG TTACGAATTT ATGTGGAAGC GGCGATTGAT
TTTCCGGAAG AGGAAATTGA TTTCTTATCA GACGGCAAGG TAGCGGGTCA GTTACAGCAT
ATTTTAGAGC AACTGCACCG TGTTCTCGCG TCTGCCCAGC AAGGTGTGTT ATTACGAGAA
GGAATGTCCG TTGTTATTCT GGGGCGTCCG AATGCGGGTA AATCCAGTTT ACTCAATGCC
TTGTCGGGTA GAGAATCCGC TATCGTTACC GATATTGCTG GCACCACACG CGATATTGTG
AAAGAAGAAA TTCAGATTGA TGGCATGCCA TTGCATGTGC TGGATACCGC GGGATTAAGA
GAAGCCACCG ATGCCGTGGA ACAAATTGGA ATCCAGCGGG CCTGGGCGGC CATAGAAGAA
GCCGACCGTA TTTTGGTTAT GGTTCAGGCC AATGAAGCGA TTCATCCGGA AGACCAAGCC
ATTTTGGAAA AAATGCCATC CCATATTCCG GTGACACTGA TTCATAATAA AATTGATTTG
ATTGAAAAAT CCCCCGAGCT GTCAGAAAAT GACGGTGAAA CGGAAATCTG GCTTTCCGCC
AAACACCATT TAGGGTTGGA TTTACTAAAG CAGCATCTTA AAACAGAAAT GGGGTATGCC
CAGACCGAAG AAGGTGTGTT TATGGCACGC AAACGTCATT TGGAAGCATT GGAAACGGCG
TTGCATTTTG TTGAAACCGG TCAACAACAA TTGGAACATT TCGCGGCAGG AGAGTTGTTG
GCAGAAGATT TACGACAGGC GCAGCAAGCG TTGTCTGAAA TTACTGGACA ATTTACCTCC
GATGATTTGT TGGGACGTAT CTTTACCTCG TTTTGTATCG GTAAATAA
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| Protein sequence | MTKRPFQGVL RFHQAFKFTE RILKLDFSTN DTIAAIATAP GRGGVGIVRV SGIKAAEIAE
HVLGKCPKPR YAHYGPFLGA EGQVLDQGIA LFFPNPHSFT GENVLELQGH GGPVILQWLL
ERVVQLGARL AEPGEFSKQA FLNDKLDLAQ AEAIADLIDA SSQQAARSAL RSLQGDFSNQ
VNELVEQLIQ LRIYVEAAID FPEEEIDFLS DGKVAGQLQH ILEQLHRVLA SAQQGVLLRE
GMSVVILGRP NAGKSSLLNA LSGRESAIVT DIAGTTRDIV KEEIQIDGMP LHVLDTAGLR
EATDAVEQIG IQRAWAAIEE ADRILVMVQA NEAIHPEDQA ILEKMPSHIP VTLIHNKIDL
IEKSPELSEN DGETEIWLSA KHHLGLDLLK QHLKTEMGYA QTEEGVFMAR KRHLEALETA
LHFVETGQQQ LEHFAAGELL AEDLRQAQQA LSEITGQFTS DDLLGRIFTS FCIGK
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