| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2167 |
|---|
| Symbol | |
|---|
| ID | 3761332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2389571 |
|---|
| End bp | 2391112 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637786916 |
|---|
| Product | ATP synthase F1, alpha subunit |
|---|
| Protein accession | YP_392429 |
|---|
| Protein GI | 78486504 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000771452 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGA ATGCCTCTGA AATCAGCAAC CTAATCAAAG ACCGTATTAA AGGGTTTGAC
GGTGCTGCAG AGTCTGGCAG TGAAGGAACG GTTGTCAGTA TCGCTGACGG TATCGCTCTT
ATTCATGGCG TGTCAGATGT AATGTATGGT GAGATGGTTC AATTCGACGA AGCCACTTTC
GGTATGGCGC TTAACCTAGA GCGTGATTCT GTAGGGGTTG TTGTACTTGG TGAATATGAG
CACATCTCTG AAGGTGACAA GGTAACTTGC ACCGGTCGTA TTTTAGAAGT ACCAGTAGGT
CCTGAGCTGA ATGGTCGCGT TGTTGACGGT TTAGGTCGTC CAATCGACGG TAAAGGTTCA
ATTGACGCGA AAGTCACTTC ACCAATCGAG CGTATCGCGC CGGGTGTTAT CGAGCGTCAA
TCAGTTGACC AACCAATGAT GACAGGTATC AAGTCAATTG ACTCTATGAT TCCTGTGGGT
CGTGGGCAAC GTGAGTTGAT CATCGGTGAC CGTCAGACTG GTAAAACAGC TATTGCTATC
GATGCAATCA TTTCACAAAA GAATACTGGT GTGAAGTGTA TCTACGTTGC AATGGGCCAA
AAAGCGTCTA CGGTTAACAA TGTGGCTCGT AAGCTTGAAG AATATGGTGC AATGGATAAC
ACAGTTATTG TTGCGGCAAA TGCTTCAGAT CCAGCTGCAC TGCAATACTT AGCCGCTTAT
GCCGGTTGTG CGATGGGTGA ATACTATCGT GACCGTGGTG AAGATGCGTT GATCATCTAT
GATGACTTAA CAAAACAAGC TCAAGCTTAT CGTCAAATTT CATTACTACT TCGCCGTCCA
CCAGGACGTG AAGCTTTCCC TGGTGATGTA TTCTATCTAC ATTCACGTCT ACTTGAGCGT
GCTGCTCGTG TAAACGCTGA GTATGTTGAG AAATTTACCA ATGGTGAAGT AAAAGGTAAA
ACTGGTTCAT TAACAGCCTT ACCGATTATT GAAACACAAG CGGGTGACGT ATCTGCATTC
GTACCAACTA ACGTAATTTC GATTACAGAT GGTCAGATCT TCCTTGAAAC AGGTTTGTTC
TCTCAAGGTA TCCGTCCTGC TGTTAATGCG GGTCTATCAG TATCACGTGT TGGTGGTTCT
GCTCAGACTA AAGCAATCAA GAAATTGGGT GGTGGTATCC GTCTAGATTT GGCTCAGTAT
CGTGAATTAG CGGCATTCGC TCAGTTCGCT TCTGATCTTG ATCCTGCAAC AAAAGCACAG
CTAGAGCGTG GTAAGCGCGT AACTGAGCTA ATGAAGCAGA AGCAGTACTC ACCTTTAACT
ATCGCTGAGA TGGCTGTATC ACTATACGCT GCAAACGAAG GTTACTTAGA TGACGTTGAA
GTCGAAAAAG TACTGGATTT CGAAGCAGCT TTACATGCCT ATCTAAATTC TAACAATGCT
GATTTAGCGG CGAAGATTAA TGCTAAAGGT GACTGGAATG ATGAAATCAT TTCGGAAGTT
AAAGCAATGA TCGATGCTTT TAAAGCAAAC GGCGTTTATT AA
|
|---|
| Protein sequence | MQLNASEISN LIKDRIKGFD GAAESGSEGT VVSIADGIAL IHGVSDVMYG EMVQFDEATF
GMALNLERDS VGVVVLGEYE HISEGDKVTC TGRILEVPVG PELNGRVVDG LGRPIDGKGS
IDAKVTSPIE RIAPGVIERQ SVDQPMMTGI KSIDSMIPVG RGQRELIIGD RQTGKTAIAI
DAIISQKNTG VKCIYVAMGQ KASTVNNVAR KLEEYGAMDN TVIVAANASD PAALQYLAAY
AGCAMGEYYR DRGEDALIIY DDLTKQAQAY RQISLLLRRP PGREAFPGDV FYLHSRLLER
AARVNAEYVE KFTNGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETGLF
SQGIRPAVNA GLSVSRVGGS AQTKAIKKLG GGIRLDLAQY RELAAFAQFA SDLDPATKAQ
LERGKRVTEL MKQKQYSPLT IAEMAVSLYA ANEGYLDDVE VEKVLDFEAA LHAYLNSNNA
DLAAKINAKG DWNDEIISEV KAMIDAFKAN GVY
|
|---|
| |