| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2161 |
|---|
| Symbol | |
|---|
| ID | 3761326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 2384163 |
|---|
| End bp | 2385020 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637786910 |
|---|
| Product | 4-hydroxybenzoate polyprenyl transferase |
|---|
| Protein accession | YP_392423 |
|---|
| Protein GI | 78486498 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACA AACAGCAATT GCAAGCCTAT CTTCAACTGA CCCGTATAGA TCGGCCAATT
GGCATTTACT TGGTGTTATG GCCGGCATTA TGGGCACTGT GGCTAGCGGC CGATGGCATG
CCGCCTATGT CTATTTTGAT TATCTTTATA CTGGGCGCCG TCATTATGCG TTCAGCAGGG
TGCGTCATCA ATGATTATGC CGATCGTCAT TTCGATGGTT ACGTCACGAG AACTTGCGCA
CGTCCGCTTG CAACGGGTCA GTTAACGGAA CGACAAGCCT TAAAATTCTT TTTCGTGCTC
TGCCTACTCG CATTTGGACT GGTTTTGTTT TTGAACCCCT TTACGATTCT GTTATCACTG
GGTGCTGTGG GGCTGGCGAT TCTCTATCCT TTTATGAAGC GCCATACGTT TTGGCCACAG
GCTTTTTTAG GAGCTGCATT TGCCTGGGCC ATTCCGATGG CGTTTGCCGC GATCCAAAAT
CAAGTGCCTT GGCAGGCCTG GGTAATTTTT GGGGTGACGT TAGTCTGGGC GCTGGTGTAC
GATACGGCGT ATGCCGTTGC GGATAAAGAA GATGATGTAA AACTGGGGAT TAAATCGACA
GCGATTTTAT TTGGTGATCG CGTTCAAGAA ATCATCGGTT TTTTTCAGGC GATTATGCTG
TTGGGGTTTC TTTGGATCGG TGATTTGTTT GGGTTATCAT GGCTTTATTA TGGTTCGGTT
TTGATTGCGG CAGGGTTTTT TGTTTATCAT CAATATCTAT TGAGTTTTGA TCAACCACAA
AAAGCCTTTA AAGCATTCTT AAATAATCAC TGGGTCGGTC TGGTGATTTT GATTGGGATC
ATGCTTGATA CGTTGTAA
|
|---|
| Protein sequence | MIHKQQLQAY LQLTRIDRPI GIYLVLWPAL WALWLAADGM PPMSILIIFI LGAVIMRSAG
CVINDYADRH FDGYVTRTCA RPLATGQLTE RQALKFFFVL CLLAFGLVLF LNPFTILLSL
GAVGLAILYP FMKRHTFWPQ AFLGAAFAWA IPMAFAAIQN QVPWQAWVIF GVTLVWALVY
DTAYAVADKE DDVKLGIKST AILFGDRVQE IIGFFQAIML LGFLWIGDLF GLSWLYYGSV
LIAAGFFVYH QYLLSFDQPQ KAFKAFLNNH WVGLVILIGI MLDTL
|
|---|
| |