Gene Tcr_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2137 
Symbol 
ID3761302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2358616 
End bp2359140 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content43% 
IMG OID637786886 
Productshikimate kinase 
Protein accessionYP_392399 
Protein GI78486474 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.628527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAGAG AAAGTATTTT TTTAGTAGGA CCCATGGGTG CTGGTAAGTC CACTGTCGGC 
CGTTTTTTAG CTGATAAACT GCATTATCAG TTTTTAGACA GCGATCAAGT GATAGAAGAC
AAAACCGGCG CGACGATTCC AATGATTTTC GATATTGAAG GAGAGTCAGG GTTTCGTGCG
CGCGAAAAGG CCGCGATTGA TGACTTAACG CAGCAATCAG AAATTGTGCT TGCCACAGGT
GGGGGCGCTA TATTAAACCC TGAAAATCGT AAAAATCTGC GTTCAAGAGG GTTTGTGGTT
TATTTAAAAT CCTCAGTAGA TTCTTTGGTT CAACGAACCC GGCATGATCG TAATCGTCCG
TTGTTACAAA CAGAAAATCC AGAGCAGGTT TTAAGAAAGC TCATTGAAGA GCGTGGCCCT
TTGTATGAGG AAGTGGCCGA TTTGGTGATT CAAACCGAGC AGGTTTCCGT GCATCGTGTG
GTTAAGCAGA TTCTGGATAA GTTGGCAGAG CAAAAAATCA TTTAA
 
Protein sequence
MHRESIFLVG PMGAGKSTVG RFLADKLHYQ FLDSDQVIED KTGATIPMIF DIEGESGFRA 
REKAAIDDLT QQSEIVLATG GGAILNPENR KNLRSRGFVV YLKSSVDSLV QRTRHDRNRP
LLQTENPEQV LRKLIEERGP LYEEVADLVI QTEQVSVHRV VKQILDKLAE QKII