Gene Tcr_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2135 
Symbol 
ID3761300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2356597 
End bp2357514 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content45% 
IMG OID637786884 
Productaldose 1-epimerase 
Protein accessionYP_392397 
Protein GI78486472 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000747241 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAG GAGTGTTAGC AGAAATGATT CAGCAATTTG AAGTCACAGG TGTTCATCTT 
TCCATGCGAG AGCAGTTAAT GATGATTGAG GTCGAAAACG ATTTCGCTAA GGCCACAATT
ACGCCACATG GGGCATCTGT TCTGAGTTTT GTACCGAAGA GCGGCAACGC ATCAGGACAG
GATTTGTTGT GGGTATCCGA TGCGGCTGTG TATACGGGCG AGAAGCCGGT TCGCGGTGGT
ATTCCTATTT GTTGGCCATG GTTTGGTCCG TCTCAGGAAG CTGGGCTTCC GGCACATGGG
TTTGTTCGTA ACCGCGTTTG GCATTTAGAC AGCGTTCGAA ATTTAGAGGC GGGGGTAACG
GAAGTCATTT TAATGCTTGA GTCGGATGAC GCTTCTTTGG CTGTCTGGCC ACATGCCTTT
CGTTTGGAAC TGAAAATAGA GATTGGAACC GAGTTGGTGA TGACGCTGAT TACGCATAAC
TTGAACGATC ATGATATTGA AGTGACCGAA GCTTTTCATT CTTATTTTAC GGTTTCCGAT
GCTGAATCGA TTCAAGTGGA TGGGTTGGTG CATAGCTTTT GTTATGACAA ATTAACGAAT
GCCGATCCAG TTGAGCAGAC CGAGAGTTTA AAGATTACCC CTCCTATCGA TTCGGTTTTT
ATTGATCAGC TAGCGCCGAT TAAAATCAAA GACGCTCAGT TGCAAAGAAA TATCTGCATA
GAAAAGGGCA ATGGTCGTTC TGCGGTGGTG TGGAATCCTG GTCCGGAAAT CATTAAAGGA
TTTGCTGACA TGCCGAATGA TGCTTGGCCG ACGATGTTAT GTGTTGAGGC CGGTAATGTA
TTGCAAAATG CGGTCTGGAT TCCAAGTGGC GAGAAGCATA AATTTATTAT GAAACTTTAT
GCGGAAGACT TTCATTAA
 
Protein sequence
MERGVLAEMI QQFEVTGVHL SMREQLMMIE VENDFAKATI TPHGASVLSF VPKSGNASGQ 
DLLWVSDAAV YTGEKPVRGG IPICWPWFGP SQEAGLPAHG FVRNRVWHLD SVRNLEAGVT
EVILMLESDD ASLAVWPHAF RLELKIEIGT ELVMTLITHN LNDHDIEVTE AFHSYFTVSD
AESIQVDGLV HSFCYDKLTN ADPVEQTESL KITPPIDSVF IDQLAPIKIK DAQLQRNICI
EKGNGRSAVV WNPGPEIIKG FADMPNDAWP TMLCVEAGNV LQNAVWIPSG EKHKFIMKLY
AEDFH