Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_2135 |
Symbol | |
ID | 3761300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2356597 |
End bp | 2357514 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786884 |
Product | aldose 1-epimerase |
Protein accession | YP_392397 |
Protein GI | 78486472 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000747241 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAG GAGTGTTAGC AGAAATGATT CAGCAATTTG AAGTCACAGG TGTTCATCTT TCCATGCGAG AGCAGTTAAT GATGATTGAG GTCGAAAACG ATTTCGCTAA GGCCACAATT ACGCCACATG GGGCATCTGT TCTGAGTTTT GTACCGAAGA GCGGCAACGC ATCAGGACAG GATTTGTTGT GGGTATCCGA TGCGGCTGTG TATACGGGCG AGAAGCCGGT TCGCGGTGGT ATTCCTATTT GTTGGCCATG GTTTGGTCCG TCTCAGGAAG CTGGGCTTCC GGCACATGGG TTTGTTCGTA ACCGCGTTTG GCATTTAGAC AGCGTTCGAA ATTTAGAGGC GGGGGTAACG GAAGTCATTT TAATGCTTGA GTCGGATGAC GCTTCTTTGG CTGTCTGGCC ACATGCCTTT CGTTTGGAAC TGAAAATAGA GATTGGAACC GAGTTGGTGA TGACGCTGAT TACGCATAAC TTGAACGATC ATGATATTGA AGTGACCGAA GCTTTTCATT CTTATTTTAC GGTTTCCGAT GCTGAATCGA TTCAAGTGGA TGGGTTGGTG CATAGCTTTT GTTATGACAA ATTAACGAAT GCCGATCCAG TTGAGCAGAC CGAGAGTTTA AAGATTACCC CTCCTATCGA TTCGGTTTTT ATTGATCAGC TAGCGCCGAT TAAAATCAAA GACGCTCAGT TGCAAAGAAA TATCTGCATA GAAAAGGGCA ATGGTCGTTC TGCGGTGGTG TGGAATCCTG GTCCGGAAAT CATTAAAGGA TTTGCTGACA TGCCGAATGA TGCTTGGCCG ACGATGTTAT GTGTTGAGGC CGGTAATGTA TTGCAAAATG CGGTCTGGAT TCCAAGTGGC GAGAAGCATA AATTTATTAT GAAACTTTAT GCGGAAGACT TTCATTAA
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Protein sequence | MERGVLAEMI QQFEVTGVHL SMREQLMMIE VENDFAKATI TPHGASVLSF VPKSGNASGQ DLLWVSDAAV YTGEKPVRGG IPICWPWFGP SQEAGLPAHG FVRNRVWHLD SVRNLEAGVT EVILMLESDD ASLAVWPHAF RLELKIEIGT ELVMTLITHN LNDHDIEVTE AFHSYFTVSD AESIQVDGLV HSFCYDKLTN ADPVEQTESL KITPPIDSVF IDQLAPIKIK DAQLQRNICI EKGNGRSAVV WNPGPEIIKG FADMPNDAWP TMLCVEAGNV LQNAVWIPSG EKHKFIMKLY AEDFH
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