Gene Tcr_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2113 
Symbol 
ID3761294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2336396 
End bp2337955 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content45% 
IMG OID637786861 
ProductBilirubin oxidase 
Protein accessionYP_392376 
Protein GI78486451 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTA ACAATCAATC CTCACAGCGT ACGACAGGAG AAAATATGAA CAGACGACAA 
TTTATCCAAA AAAGCCTGAT TGGGCTGACG CTCCTTCCTC AGGCAGGCAA TGCCATGGGA
ACGTTACTTG GCGGGGTTGG ACAGGACGAT TTTATCCATC CTGTTTTTCC TAAAGTGGAC
TTTTACCTTC CGGATTTAGA ACAGGGTCAA CCTCTTAATG GAAAGCAGCG CTTTACATTA
ACACTGCAAC AGGGAAAAAC GAAGATCCTG CCCGATGTCA CGACTCAGAC CATTGGCATC
AATCAAGATT TTTTAGGCCC CGTCATTCGG ATCAAAAAAG GCCAAAAGCT TCGCATGGAA
GTCACCAATC AACTGAATGA AGTGGCGGCA CTTCACTGGC ATGGCATGAT TTTGCCTGCA
ACAGAAGATG GCGGGCCTCA CCAACCCATC TCCCCCGGAA AAACCTGGAT AGCCGAATGG
GACGTGATTA ATGAACCCTC CACATTATTT TACCATTCAC ACACGCACCA ACATACCGGA
TCCCAAGTTT GGCGTGGTTT AGGCGGACAG ATGCAAGTGG TTGATGAAGA ACGCGATGCC
GAACTGGGGC TGCCTCATGA ATATGGAATG GATGATTTCC CGGTCATACT CATGGATCGC
GCTTTTGACG AAACCGGAGA ATTCATCTAC AGCAATGAAC GGATGAACAA AATGCAAGGC
ATGCACGGCG ACACCATGCT GGTGAATGGC CGAGCCAACT CCGTTTTACG TCCTCAAAAA
GATCGTATTC GTTTAAGACT GCACAATGCT TCCAATGCAC GTTTTTACGA TTTGGTGTTT
TCAGACAAGC GTTCTTTTCA AGTCATTGCA GGAGACGGCG GTTTATTGGA AACACCACAA
ACCCTCAACC GCCTTCGATT ATCGCCAGCA GAACGCGCCG AAATTCTGGT TGATCTTTCC
GATCACCAAC CCGTCTCACT AAAAACCCTA GCGGGTTATG GAAACTTATC GATGGGGATG
GGCGGCATGA TGAGAGATAC ATCAAAGCTT GATCAAGACT ATGATTTATT TCACATCGAC
CCCAGAAAAT CCGAAGCAAC TAAACCCTCG ATGATTGAGC GTTTAATCCC ATTACCTGAC
TGGTCCAATG TCGAAATAGC GCAAACGCGA ACCATGAATT TAGAAATGCA AATGGGACCT
AGAATGATGT TTGGTTCAGG TGGTTTTACA ATCAATGGAC AAGCTATGCA AATGGAGGTA
ATAAATGAAC GTTTAACCGC CAATAGCTTT GAAATATGGC ACCTTAAAAA CCCATCAATG
ATGCATCACC CTTTTCACAT TCATAACACT CAATTCAAAG TCTTGGATCG AAATGGCCAA
GCGCCTTATC CATGGGAACA AGGATTAAAA GATACAGTGA CTGTTCATCG CGATGAAACA
GTTCGCATAT TGTTACCGAC TGGTCCTTAT TATAACAATC AAGAACCTTA TATGTACCAC
TGTCACATCT TAGAGCATGA AGATGCGGGA ATGATGGGAC AATTTATCGT AACAACTTAA
 
Protein sequence
MTANNQSSQR TTGENMNRRQ FIQKSLIGLT LLPQAGNAMG TLLGGVGQDD FIHPVFPKVD 
FYLPDLEQGQ PLNGKQRFTL TLQQGKTKIL PDVTTQTIGI NQDFLGPVIR IKKGQKLRME
VTNQLNEVAA LHWHGMILPA TEDGGPHQPI SPGKTWIAEW DVINEPSTLF YHSHTHQHTG
SQVWRGLGGQ MQVVDEERDA ELGLPHEYGM DDFPVILMDR AFDETGEFIY SNERMNKMQG
MHGDTMLVNG RANSVLRPQK DRIRLRLHNA SNARFYDLVF SDKRSFQVIA GDGGLLETPQ
TLNRLRLSPA ERAEILVDLS DHQPVSLKTL AGYGNLSMGM GGMMRDTSKL DQDYDLFHID
PRKSEATKPS MIERLIPLPD WSNVEIAQTR TMNLEMQMGP RMMFGSGGFT INGQAMQMEV
INERLTANSF EIWHLKNPSM MHHPFHIHNT QFKVLDRNGQ APYPWEQGLK DTVTVHRDET
VRILLPTGPY YNNQEPYMYH CHILEHEDAG MMGQFIVTT