Gene Tcr_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2081 
Symbol 
ID3761262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2299854 
End bp2300861 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID637786829 
Productphosphonate ABC transporter inner membrane protein 
Protein accessionYP_392344 
Protein GI78486419 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGC AAGTAGAAAA TGCCATAAAA CGCGATTGGC GTGAATGGCA AACTTATCAA 
GCCATCACCC CCAAAATAAT CTTCGGCTTT TTTATTACGT TTGTTTTACT GTCTTGGTCT
GCACACAACA CCGAAATGGA TAGAGCCGCA GTAGAAACTG GTCAGGCGGT ATTATCCGCT
GTCGGCATTG GAAACTCGGA TGTATTGGAT GGTGTCTCAA AATTTGGTAG CCAGGCCTTT
CCTATTCAAT TTTCAACGCG TACCGAATTA ACACGCCTAG AAGATGTCGA TTTAGAGAAT
CTACCATGGT TGTCTTACGT TGAAGACGGT GTCTCTAGAG AGTATGACGT AGACACTGAT
ACATGGACGC AAAGCAAGAC AGAGTACTTA GTCGACCCCA TCGGTTACCT GAAAAAAGTA
CTGAAGATGA TGTGGGAAAC CATCGAAATG GGGTTCTGGG GTACCGCAAT TTCAATCGTG
ATTTCTTTAC CCTTAGGCAT TTTAGCCGCC CGTAACTTTT CACCCCATCC GATCATTTAT
CAAGTGGCGC GTGGTTGGCT TAGTTTTCAC CGAGCTATGC CTGAGCTAAT TGTGGCGCTA
TTCTTGGTCT TAATCTATGG ATTCGGCCCT ATTGCTGGGG TTCTAGCGCT TGCAATTCAT
ACATCAGGCG TGCTGGGAAA GTTCTTTGCC GATGAGATTG AAAATGCACC TAAAGGTCCT
CAAATGGCAT TAAGTTCAGC AGGGGCAAAC CCATTAAAAG TCTTACGTTA TGCAGTTTTC
CCACATGTCC TACCCGCTTG GATTGCCTAC ATTCAATATA TTTTTGAACG TAATATTCGT
ACCGCCACCG TATTGGGTAT TGTCGGTGCG GGAGGAATTG GCATGGAATT AAAAGGACGT
TGGGACCTGT TTGATTACGA CCATGTTGCA ACCATTTTAT TAATCATCTT TATCACAGTC
GTATTGCTGG AAGCTTCCAC GCAAAAATTA CGCAACAAAA CACTTTGA
 
Protein sequence
MNKQVENAIK RDWREWQTYQ AITPKIIFGF FITFVLLSWS AHNTEMDRAA VETGQAVLSA 
VGIGNSDVLD GVSKFGSQAF PIQFSTRTEL TRLEDVDLEN LPWLSYVEDG VSREYDVDTD
TWTQSKTEYL VDPIGYLKKV LKMMWETIEM GFWGTAISIV ISLPLGILAA RNFSPHPIIY
QVARGWLSFH RAMPELIVAL FLVLIYGFGP IAGVLALAIH TSGVLGKFFA DEIENAPKGP
QMALSSAGAN PLKVLRYAVF PHVLPAWIAY IQYIFERNIR TATVLGIVGA GGIGMELKGR
WDLFDYDHVA TILLIIFITV VLLEASTQKL RNKTL