Gene Tcr_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2070 
Symbol 
ID3761231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2286756 
End bp2287802 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content38% 
IMG OID637786819 
Producthypothetical protein 
Protein accessionYP_392334 
Protein GI78486409 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAG AGAATAAAGG GTTATCATGG CTGGTAGGCA TGGCTTCTGT CATCATCATT 
TTGACAGCAT TGAAAATGGC AGAAAGCGTG GTCGTTCCGA TTTTATTAGC GATTTTTATC
TCCATTATTT CTATCCCTTT CATCCGACTC ATGATGCGTT ATTCCATTCC GAATTGGTTG
GCTATTATCT TGATGCTTGG TGTTTGGATT ACACTGTTGA TGTTGTTCGT TTTGATCTTG
AGCCATTCCG CGCAAACATT TAACAATAAT ATTCCAGTAT ATGAAGACGG ATTGAATGAT
TTACTGGTTG AGCTGTCACC GCTGTTTCAG TATTGGTCTT TTCCGTTTTT TGAAGCCACG
TTAAACGAGC ATTTTAGCTC TGAATCCATC ATTCAGTTTA TGGCGGATAC CTTGACCGGA
GTCAGTGTCT TTGTCATGAA CACTTTTTTG GTGCTGTTTA TTACGATTTT TTTGTTGATG
GAGGAAAGCA GTCTTACTCA GAAATTTCAA GCAGCTTGGC CGAATTCAGA GTATAAGATT
CAAGCGATTG CCGGTTTTTT CAAACAGGTG AATAGATATA TTTTTATTAA AACTGTAATC
AGCTTTATAA CAGGTGTTTT AGTAACACTT TTATTGATGT TTCTTGACGT TGATTTTCCC
TATTTATGGG GTGTTTTAGC CATGCTGATG AACTATATTC CAAACATCGG TTCGTTGATT
TCAGCTATTC CGCCGGTCTT TCTAGCGTTG ATTCAGGTTG GGGTTTTTGA TGCGGTTTTG
GTTATGAGCG GTTTTTTAAT CATCAATGTG GTTTTGGGTA ATTTCATTGA GCCTCGTTTA
ATGGGCTTTG AGTTTGGCTT GTCTCCCCTT GTGGTGTTTT TGTCATTAAT GGTCTGGGGG
TGGATGTTTG GCCCAGTAGG GATGATTTTA TCAATCCCTT TGACAATGAT TGTTCAGATA
GCTCTTTTTC AGAATAAAGA TACCCGAGCA ATCGCGGTTT TATTAGGCAA TAATATACCG
AAATCACGTT TATCTAATGC AGAATAG
 
Protein sequence
MIRENKGLSW LVGMASVIII LTALKMAESV VVPILLAIFI SIISIPFIRL MMRYSIPNWL 
AIILMLGVWI TLLMLFVLIL SHSAQTFNNN IPVYEDGLND LLVELSPLFQ YWSFPFFEAT
LNEHFSSESI IQFMADTLTG VSVFVMNTFL VLFITIFLLM EESSLTQKFQ AAWPNSEYKI
QAIAGFFKQV NRYIFIKTVI SFITGVLVTL LLMFLDVDFP YLWGVLAMLM NYIPNIGSLI
SAIPPVFLAL IQVGVFDAVL VMSGFLIINV VLGNFIEPRL MGFEFGLSPL VVFLSLMVWG
WMFGPVGMIL SIPLTMIVQI ALFQNKDTRA IAVLLGNNIP KSRLSNAE