Gene Tcr_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2055 
Symbol 
ID3761972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2268512 
End bp2269375 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID637786804 
Producthypothetical protein 
Protein accessionYP_392319 
Protein GI78486394 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000329302 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TGACCGCTTT TGCTTTAACC AAACACACTT TTGACTGGGG GTCACTCACT 
TGGGAGATTC GCGCCGTCAA TCAACGTTTT TTGGAAATGC ACTTACGGCT TCCAGAAAGC
ATTAAGCCAC TCGAAATGAC GATTCGAGAA CACCTCAAAA AACACATTTC TCGAGGCAAA
GTTGAAGCGA CCTTACGCCT TTCTGTGACG CAATCGGAAA CCGAGCTCAG CGTGAATGAA
CCACTGCTAA AAGATCTGAC CCAAGCCATT CAGACTATAC AAATGGCGTT ACCGGAAGCC
ACACACCTCA ACCCCATCGA CTTACTGAAA TGGCCAGGCC TGCTGCAAAA CTTGAATGCC
GAAAACAATG ACGCATTCAA TAACGATATT TTAACCGCAC TTCAAACATG CTTGAACGAG
TTTAATCAAA CCCGTTCACG AGAAGGAGCG TCGCTTCAAA AAATCATTAT CGAAAAAACG
CACGCCATGA GAGAGCTCAT CGGCCGAGCA CAGGAATTAC TGCCTGACAT ACAAGCCCAT
TTTGCCGAAC AGCTGAAACA ACGTATTATT GATTTGGCCG ATTCATTAGA TGACGCCCGA
TACCACCAGG AAGTGGCGAT TCAAGCCCAA AAAATGGATG TCGCTGAAGA GCTCGATCGC
CTCAACACCC ATCTGGATGA AGTGGAGCGA CTGGTACAAA CAACCGGGGT GATGGGACGT
CGTTTAGATT TTTTAATGCA GGAACTGAAC CGCGAAGCAA ATACATTAGG GTCCAAATCC
ATCGACAGTC GCACGGCCCA AATCAGCGTG GAACTCAAAG TACTAATAGA GCAAGTCCGC
GAACAAATCC AAAATATTGA ATGA
 
Protein sequence
MKSMTAFALT KHTFDWGSLT WEIRAVNQRF LEMHLRLPES IKPLEMTIRE HLKKHISRGK 
VEATLRLSVT QSETELSVNE PLLKDLTQAI QTIQMALPEA THLNPIDLLK WPGLLQNLNA
ENNDAFNNDI LTALQTCLNE FNQTRSREGA SLQKIIIEKT HAMRELIGRA QELLPDIQAH
FAEQLKQRII DLADSLDDAR YHQEVAIQAQ KMDVAEELDR LNTHLDEVER LVQTTGVMGR
RLDFLMQELN REANTLGSKS IDSRTAQISV ELKVLIEQVR EQIQNIE