Gene Tcr_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2028 
Symbol 
ID3761757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2238754 
End bp2239470 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content47% 
IMG OID637786777 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_392292 
Protein GI78486367 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTT CCATTTATCG TTACAACCCT GAAGTGGATG CCGAGCCTTA TCTACAAGAC 
TATGAATTGG ATGACGCACT GATCGGACAC GATATGATGC TGTTGGAAGC ATTGGAAAAG
TTGCGTGAAC AAGATCCCGG CTTGACATTT CGGAGTTCTT GTAAAGAAGG CGTTTGCGGG
TCAGACGGCA TGAACATCAA TGGTGAAAAC AAACTCAGTT GTATTACCCG TGTCTCGGAG
CTAAAACAAC CCATCAAGAT TCGACCGTTA CCCGGCTTGC CCGTGATTCG AGATTTGGTA
ATTGATATGG CGCAGTTTTA TGAACATTAC CATGCGGTGG ATCCGTTTTT AAAACCTGTG
CCAGACGGTG TGTCGATTGA TTTGGATCAC GAGTTGCTCC AATCACCGGA AGAGCGCGAA
AAGTTGGATG GCAGTTATGA ATGTATTCTG TGCGGATGCT GTTCGACCAG TTGTCCGTCG
TTTTGGTGGA ATCCTGACAA GTTTCACGGA CCGGCAGCCC TTTTGGCGGC GCAACGATTT
GTGGTCGACA GCCGAGACAT TACCACACGC GATCGCTTGG CGGAATTGGA TGATCCGTTT
AAAACGTTTC GTTGTCGTAA TATTCAAAAC TGTACCGCCA GCTGTCCGAA AGGGTTGAAC
CCGAGCCAGG CGATTAATGA ATTGAAATCC TTGATGCTGA AAAAACAAAT AGACTGA
 
Protein sequence
MLFSIYRYNP EVDAEPYLQD YELDDALIGH DMMLLEALEK LREQDPGLTF RSSCKEGVCG 
SDGMNINGEN KLSCITRVSE LKQPIKIRPL PGLPVIRDLV IDMAQFYEHY HAVDPFLKPV
PDGVSIDLDH ELLQSPEERE KLDGSYECIL CGCCSTSCPS FWWNPDKFHG PAALLAAQRF
VVDSRDITTR DRLAELDDPF KTFRCRNIQN CTASCPKGLN PSQAINELKS LMLKKQID