Gene Tcr_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2005 
Symbol 
ID3761205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2209090 
End bp2209575 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID637786754 
Producthypothetical protein 
Protein accessionYP_392269 
Protein GI78486344 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00242078 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTT TTAAATTACT CCCATTACTC CTGACCGGTT TTTTTCTGCT CAACAGCATG 
ACGGCTCAAG CGGCCGATGA CGGAGCCAAA GTGGTTTACC ATGTTGATTT CAAAGACCCG 
ACTCGCTATT CCGCCACCTT AACCTCCATC AACAACATCA TTAATTTTTA TGAATCTCAA 
TTAATGGAAG CCGAAGTTCA TTTGGTCTTT GTCGGATATG GCTTACGCTT TACCACGGAC 
GATGCCCTCA AAGGCACGCC ATATGCCGCT GACAAAGCGC TTTTGGAACG TCGTGACGAA 
CTCAAAGGTC GCTTGGATGC GTTAATCAAT GTGCGCGGTG TGAAAGTTCA TCTTTGTGAT 
AAAACGCGCA AAGAAGTCGG CTTGGATAAA GCGAAAGTCT ACAAAGGGAT CGACTTTACC 
GCTTCGGGTG TCGCCAAGAT CGCCATGCTC CAGAGCGAAG GGTTTGCTTA TCTGAAAATC 
CAATAA
 
Protein sequence
MRFFKLLPLL LTGFFLLNSM TAQAADDGAK VVYHVDFKDP TRYSATLTSI NNIINFYESQ 
LMEAEVHLVF VGYGLRFTTD DALKGTPYAA DKALLERRDE LKGRLDALIN VRGVKVHLCD 
KTRKEVGLDK AKVYKGIDFT ASGVAKIAML QSEGFAYLKI Q