Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1987 |
Symbol | |
ID | 3762299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2184370 |
End bp | 2186694 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637786736 |
Product | primosomal protein N' (replication factor Y) |
Protein accession | YP_392251 |
Protein GI | 78486326 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTTA AAGTTGCCGT GCCCGGCCCT TTTTTATCCC CTTTGGATTA TCGCATTCAG GCTGAAAAAG CGGATCATCG GATAGAAACA TTGGCGTTGG ATTTAGAACC GGAAGAGCAG ACAGAGTCTA AAAAATCTTT TTTGCCTGTG GTCGGCGGGC GTGTCAAAGT TCCCTTTCGC AATAAATCTT TGATTGGCAT TGTGATGGCG TTAAGTGATG ACGCGACGGT TGCCACTCAA AAGCTCAAAG CGCTTGAAGA TGTAATTGAT GAAATGCCGA TTTTTTCTGA ACAGGAAATG GCGTTACTCA GTTGGGCCAG TCATTATTAC CATGAGCCGA TTGGCAACGT CGTGCAAACA GCCCTTCCGA AACGATTAAG AGAAGGCGAG GCGGTTGACG TGGCTGGCGT GTCGGCATGG CAGTTGACCG AGGCCGGGCG AGAAGCAGAC GAACAGATAC CGTCTCGAGC CACGCAACAA AAAGCGTTAT GGCAACTGCT GCAACAGCAA GACGAGGCGC TGACAGCGGA AGTTTTAAAC CGCTCTTTGA ACCAATGGCG CCTTCCTATG AAACGGTTTC AGGAAAAGGG CTGGGTGGCT GAAACTGAAA AAAGTTGCCT GCATGCCATG CCGGTGCGTG AAAAAACAGC CAGGCCTGGT CATATTTTAA ATGCCGAGCA GCAAGCTGCG GTGGATGCGG TTTTGGCAAC GTCTGGATTT GATGCTTTTC TGGTAGAAGG GGTGACAGGC AGCGGTAAAA CGGAAGTCTA TCTAGGTATG ATTGAATCGG TCATAGCCCA AGGAAAACAA GTGTTGGTGT TGGTACCGGA GATTGGATTA ACACCGCAAA CAGTGAAACG ATTTGAAGCG TATTTGCAAG CGCCTGTTGC CGTGATGCAC TCTGGCCTTA ATGATAAAGA GCGTCATTGC GCCTGGTCGT TGGTGAAGAC GCATCAAGTG AATGTTTTAC TGGGAACGCG TTCAGCGATT TTTACGCCCT TTGCGGATTT AGGGTTGTGC ATTATGGATG AAGAGCATGA CTTATCCTTT AAGCAGCAAG ATGGGTTTCG CTATTCGGCT CGTGACTGCT TGGTTCGTCG AGCTCAGTTG GAAAATGTGC CGGTGGTATT AGGGTCGGCA ACCCCGTCTC TAGAAACCTT GCATAATGCG TTAAGCGGAC GGTATCAACA TTTGCATTTA AAGCAGCGAG CAGGCCAGGC CAAAATGCCT GAGGTTCAAT TGTTGGATGT TCGCGGGCAA GCTGAAGAAG AAGGCATCTC CCAACCGTTA AGGCAGGAAG TGGAAACCCA TTTAAAAGCC GGCGGGCAAG TGCTGTTATT TTTAAATCGA CGAGGCTTTG CGCCAGTGTT GATGTGCCAT GACTGTGGCT GGCAAGCGGC TTGCCCGAGT TGTGATGCCA ATATGACCTT TCATCAGCAA GTGAATGAAC TTCGTTGCCA TCACTGTGGC TATCAAGCAA AAGCACCGTT GGACTGTCCA AATTGTGGTT CGGCTTCCTT TGCTAAAATC GGTCAGGGCA CGGAGCGATT GGAAACGGTG GTCCAGCAAT GGTTTCCTGA TTATAAAGTC TTGCGAGTGG ATCGCGACAC GACGCGTAAT AAAGGTCAAA TGATGGCTTT GACGGAACAA GCCAGTCAAG GTCGAGCCGA TATCCTCATC GGTACCCAGA TGTTAGCAAA AGGGCATCAT TTTCCAAAAG TGACGTTGGT CGGATTACTT GATATTGATC AAGGACTTTT CAGTTGTGAC TTTCGTGCGG CCGAACGTAT GGCACAATTA GTGGTGCAAG TCTCAGGCCG AGCCGGACGA GGGGAACGGC CCGGTCAGGT GGTGATTCAA ACGCACCACC CTGAACACCC GTTATTGAAA GTGTTGGTGG CGCGTGGGTA TGAGGCGTTT GCGAAAGAAG CTTTAAAAGA GCGTGAACAA GCCGATTTGC CGCCTTATCA GTACCAGGTG TTATTGCGAG CCGAGGCGGT GGATGCGAAT GCGGGCTGGA CATTTTTAAA TGACGTTAAA AGTGCATTGA ACTTTGCTAA AATGTCGATG TTGCGTTCGT ATTTATCAGT AAACGATTCA GACGATATTA AGGCAGAGAT GTTACAGGGG CTGGAGGTGT TTGGTCCTGT GAGTGCTCCG ATGCTTCGTC GTCAAGGGCG ATACCGTTAT CAGTTGTTGT TACAAGGTGC GCATCGTGGC TTTTTACATC AATGGTTGGC TCAGGTTGAA ACGCAGCTTT ATACGTCCAA TCAAGCTAAG AAAGTTCGTT GGTCGTTAGA TGTTGATCCA CAGGAAATGA GTTAA
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Protein sequence | MFVKVAVPGP FLSPLDYRIQ AEKADHRIET LALDLEPEEQ TESKKSFLPV VGGRVKVPFR NKSLIGIVMA LSDDATVATQ KLKALEDVID EMPIFSEQEM ALLSWASHYY HEPIGNVVQT ALPKRLREGE AVDVAGVSAW QLTEAGREAD EQIPSRATQQ KALWQLLQQQ DEALTAEVLN RSLNQWRLPM KRFQEKGWVA ETEKSCLHAM PVREKTARPG HILNAEQQAA VDAVLATSGF DAFLVEGVTG SGKTEVYLGM IESVIAQGKQ VLVLVPEIGL TPQTVKRFEA YLQAPVAVMH SGLNDKERHC AWSLVKTHQV NVLLGTRSAI FTPFADLGLC IMDEEHDLSF KQQDGFRYSA RDCLVRRAQL ENVPVVLGSA TPSLETLHNA LSGRYQHLHL KQRAGQAKMP EVQLLDVRGQ AEEEGISQPL RQEVETHLKA GGQVLLFLNR RGFAPVLMCH DCGWQAACPS CDANMTFHQQ VNELRCHHCG YQAKAPLDCP NCGSASFAKI GQGTERLETV VQQWFPDYKV LRVDRDTTRN KGQMMALTEQ ASQGRADILI GTQMLAKGHH FPKVTLVGLL DIDQGLFSCD FRAAERMAQL VVQVSGRAGR GERPGQVVIQ THHPEHPLLK VLVARGYEAF AKEALKEREQ ADLPPYQYQV LLRAEAVDAN AGWTFLNDVK SALNFAKMSM LRSYLSVNDS DDIKAEMLQG LEVFGPVSAP MLRRQGRYRY QLLLQGAHRG FLHQWLAQVE TQLYTSNQAK KVRWSLDVDP QEMS
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