Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1974 |
Symbol | |
ID | 3761174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2168600 |
End bp | 2169706 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786723 |
Product | Sec-independent protein translocase TatC |
Protein accession | YP_392238 |
Protein GI | 78486313 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.812349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAA GCGCCCTTCC GCCAAACGAC CAGGAAATGA CACTGGTTCA ACACCTGTTA GAGCTTAGAA ACTCGGTTAC TAAGGGCATT CTAGCAATAC TGGTCTTGTT CATTATTTTG TTCCCGTTTG CAAACGATCT GTACCTGTAC ATCTCGGAAC CGTTATCACG CTTTTTGCCT GAAGGCACCA GCATGATTGC GACGGGTGTT GCTTCACCTT TCTTAACGCC TTTCAAGTTA AGTTTGGTGC TGGCTATTTA TTTAGCCATG CCGTTTTTAC TGTTCCAAAT CTGGTCTTTT ATCGCCCCCG CACTCTATCA GCATGAAAGA CAGCTGGTTG GCCCTTTATT GTTTTTTAGT TCATTCTTGT TTTATGCTGG TGGGGCGTTT GCTTATTACG CCGTGTTCCC GCTTGTGTTC GGTTTCTTAT CGACGGCTGC ACCGGAAGGC GTCACCATTG CAACCGACAT TTCACTTTAT TTAGACTTTG TCATCAAAAT GTTCTTCGCT TTCGGAATCG CGTTTGAAGT TCCCATTGTC GTCGTACTGT TAATTTTAAC CCGCATGGCT TCTCCACAAA AGCTATCCCA CGCTCGACCG TATGTCGTGG TAGGTGCCTT TGTCATCGGT ATGCTGTTAA CCCCTCCCGA CATCGTATCT CAAACATTAC TCGCCATTCC AATGTGGTTA TTGTACGAAG CCGGCATTAT TGTCGGCTCG GCCGTGCAAA AAGCGCGCCG CCGAAAAGAA GACGAAGAAA CGGATGACGA AGAGGACGAG ACTCCGAAAC AAGATCCGGC GGCTTCCGGT CAATCTAATG ATACAGCCTC GCCTGAATCA GACGAAATAG ACCCCTATGC CATTCCGGAA GAAGACTTTG ACAACCGTTA TGCCGATCAG CTTGAAGATG ATGAGGATTG GGACAAAACC TTTGATGAAA TTGATTCCGA ATTTTCCATC TTAGAGCAGG AATATAAAAA GCGTAAAGAA GCCGAACAAG CTGAAAAAGA CGCTCAAAAC AAAGAGGCGA AAAAAGAAGA TGATGACCTA CCTTCTGACT CAACGCCAAA CGATTCATCA GACAGCCCGT CGAAATCGGA TAAATAA
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Protein sequence | MSQSALPPND QEMTLVQHLL ELRNSVTKGI LAILVLFIIL FPFANDLYLY ISEPLSRFLP EGTSMIATGV ASPFLTPFKL SLVLAIYLAM PFLLFQIWSF IAPALYQHER QLVGPLLFFS SFLFYAGGAF AYYAVFPLVF GFLSTAAPEG VTIATDISLY LDFVIKMFFA FGIAFEVPIV VVLLILTRMA SPQKLSHARP YVVVGAFVIG MLLTPPDIVS QTLLAIPMWL LYEAGIIVGS AVQKARRRKE DEETDDEEDE TPKQDPAASG QSNDTASPES DEIDPYAIPE EDFDNRYADQ LEDDEDWDKT FDEIDSEFSI LEQEYKKRKE AEQAEKDAQN KEAKKEDDDL PSDSTPNDSS DSPSKSDK
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