Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1969 |
Symbol | |
ID | 3761169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2166228 |
End bp | 2167001 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637786718 |
Product | imidazoleglycerol phosphate synthase, cyclase subunit |
Protein accession | YP_392233 |
Protein GI | 78486308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.500643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAG CAAAACGAAT CATTCCTTGT TTAGATGTCG ACAATGGTCG AGTAGTCAAA GGGGTACAAT TTGTCGACAT CCGCGATGCT GGAGACCCGG TCGAAGTAGC GAAGCGCTAT GACGAGCAAG GCGCAGACGA AATTACGTTT CTTGACATTA CGGCGACGGC TCACGAGCGA GACACGATTG TTCATGTGGT AGAAGAAGTT GCTAGCCAAG TGTTTATCCC GTTAACCGTC GGTGGAGGCA TCCGCTCAAT TGAAGATGTA CGCACCATGC TGAACGCTGG GGCCGATAAG GTAGCGATTA ACTCTGCGGC CATTTTCAAC CCTGCTTTTG TCAAAGAGGC CTGCGACACA TTCGGTTCTC AATGCATTGT GGTGGCGATT GATGCCAAAA AAGTCAGCCC GAAAGGTGAA CCGGACAAAT GGGAAATCTT TACCCATGGT GGTCGTAAAG AAACGGGCAT TGATGCAGTT GAATGGGCCA AAGAAATGGA AACGCTTGGT GCGGGTGAAT TACTGGTCAC CAGTATGGAT AAAGACGGTA CCAAAAGTGG GTTTGATTTA GCGTTAACGC GCACCATTTC AGACAGTGTT AAAATTCCAG TCATCGCCTC AGGCGGCGTT GGAAAGCTTT CCGATTTATG TGACGGTATT ACACAAGGGC ATGCCGAAGC GGTTTTAGCG GCCAGCATCT TCCATTTTGG TGAACATACC GTCCAAGAAG CCAAACAAGC TATGCAAAAA GAAGGCATTG AGGTTCGATT ATGA
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Protein sequence | MSLAKRIIPC LDVDNGRVVK GVQFVDIRDA GDPVEVAKRY DEQGADEITF LDITATAHER DTIVHVVEEV ASQVFIPLTV GGGIRSIEDV RTMLNAGADK VAINSAAIFN PAFVKEACDT FGSQCIVVAI DAKKVSPKGE PDKWEIFTHG GRKETGIDAV EWAKEMETLG AGELLVTSMD KDGTKSGFDL ALTRTISDSV KIPVIASGGV GKLSDLCDGI TQGHAEAVLA ASIFHFGEHT VQEAKQAMQK EGIEVRL
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