Gene Tcr_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1956 
Symbol 
ID3761156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2147338 
End bp2148903 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content47% 
IMG OID637786705 
Productphosphoglyceromutase 
Protein accessionYP_392220 
Protein GI78486295 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.029965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG CCGTGCAAAT TAAAAACCGA CCAACTGGAT TGATCATCTT AGATGGCTGG 
GGACATCGTG AAGCAACGCA ACACAATGCC ATTGCACAAG CCCATACGCC AAATTGGGAC
AACCTACTTA AAGACTACCA CCATACTTTA ATCAACACTT CAGGGCTGGC CGTTGGCCTG
CCAGAAGGAC AAATGGGGAA TTCTGAAGTC GGCCACATGA ACCTAGGCGC CGGGCGCGTC
GTTTATCAAG AGCTGACGCG TATTCAAAAA GACATCGATG ACGGTCGTTT CTTTGAAAAC
AACGCCTTAG TCAAAGCGAT TGATGCCGCC AGCAATCGAG ACCATAAAGT CCACATTCTA
GGCCTTTTAT CAGATGGTGG TGTGCATTCA CACATCAGCC ACATTAAAGC CAGCATTAAA
ATGGCTCACG ACCGAGGGGC TAAAGTTTAT GTGCATATTT TCACAGACGG GCGTGATACG
GCACCGCAAA GCGCGCTTCA GTATATCGAA GAACTTGAAA CCTTTATGAA AGAACTCGGT
GGCGGACGCA TAGCATCGGT CACCGGTCGT TACTTTGCAT TAGACCGTGA CAACCGCTGG
GAACGCGTTA AAAAGGCGTA CGATGCCATT GCCTGCGGTT CGGCTGAATT TGAAGCGAAA
GACGCCAAGG AGGCGGTTGA ACTGGCTTAT GCCCGCGGTG AAAACGATGA GTTCATCCAA
GCCACCGTCA TTCCTCGCAA CAATGGCAAA CCAGCTCGCG TTAAAGACGG TGACTCTGTT
ATCTTCATGA ACTTCCGTTC TGACCGTGCA CGCCAGTTGA CTGAGGCTTT CATCATGGAT
GACTTTGCTG ACTTTCATCG CTGTAAAACA CCGGTTTTAT CAGCTTTTGT CACCTTAACG
GAATACAAAA AGAATTTTGA AAAATTCGGC GCGTTAGTGG CTTATCGCCC AACCAGTCTT
CGAAACACCT TTGGTGAATA TGTTTCGAAA AAAGGTCTCA AACAACTTCG CATCGCGGAA
ACCGAGAAAT ATGCCCACGT AACTTTCTTT TTCAACGGTG GCGTTGAAGA ACCGAACGAC
AACGAAGTGC GCATATTAAT CAACTCACCA CAAGTTGCCA CTTATGATCT TCAGCCGGAA
ATGAGCTTAC CGGAACTTAA GGAAAAGCTC ATTGATGCGA TCAAATCAGG TGAATACGAC
ACTTTCATCT GCAACATTGC CAACCCAGAC ATGGTTGGAC ACACAGGGGA CTTTAACGCC
TGCGTCCAAG CGGCTGAGGC GGTTGATGAA GCATTAGGCG AAATCTTAGC CACGATTAAA
GCGGTCGATG GCGAAGCCAT TGTCACCGCA GACCATGGTA ATATGGAAAT GCTGTTTAAT
GAAGAAACAG GTAAGCCGCT TACGTCACAC ACAACTTTCC CGGTTCCTTT CGTTTATTTC
GGCAAGAAAG GTTACCCTTT GAAAGACGGT GGTGCGTTAT GTGACGTGAT TCCAACCTTG
TTAGACATGA TGGGAATTGA AAAACCGGAA GAAATGACTG GCACGTCTTT AATTGACAAA
GCTTAG
 
Protein sequence
MTKAVQIKNR PTGLIILDGW GHREATQHNA IAQAHTPNWD NLLKDYHHTL INTSGLAVGL 
PEGQMGNSEV GHMNLGAGRV VYQELTRIQK DIDDGRFFEN NALVKAIDAA SNRDHKVHIL
GLLSDGGVHS HISHIKASIK MAHDRGAKVY VHIFTDGRDT APQSALQYIE ELETFMKELG
GGRIASVTGR YFALDRDNRW ERVKKAYDAI ACGSAEFEAK DAKEAVELAY ARGENDEFIQ
ATVIPRNNGK PARVKDGDSV IFMNFRSDRA RQLTEAFIMD DFADFHRCKT PVLSAFVTLT
EYKKNFEKFG ALVAYRPTSL RNTFGEYVSK KGLKQLRIAE TEKYAHVTFF FNGGVEEPND
NEVRILINSP QVATYDLQPE MSLPELKEKL IDAIKSGEYD TFICNIANPD MVGHTGDFNA
CVQAAEAVDE ALGEILATIK AVDGEAIVTA DHGNMEMLFN EETGKPLTSH TTFPVPFVYF
GKKGYPLKDG GALCDVIPTL LDMMGIEKPE EMTGTSLIDK A