| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1897 |
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| Symbol | |
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| ID | 3761091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2075226 |
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| End bp | 2078738 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786640 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_392161 |
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| Protein GI | 78486236 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATC CAAATCGACC GATCATTGAT GAACAAGTCA CCATTCCTGA GCATTATCGT
ATTATTTCCC GTACCGACCC ACGCGGGACC ATCTTAGAAG CCAACTCAGA ATTTATTGAA
ATCAGCGGTT ATGCGGCAGA TGAAATTCTT GGCCAACCTC ACAACATATT ACGTCACCCT
GATGTGCCCA AGGCGGTTTT TAAGGATTTC TGGGAGACCT TACAGGCTGG AAAGTCGTGG
ACACAAATTG TCAAAAACCG CACCAAAGAT GGCCGAAACT ATTGGGTTAA AGCCAATGCC
GCCCCTATTT TTGAAAGCAA TAAAATTACC GGGTATATTT CAGTTAGAAC CCCCGCCACC
GAAGAACAAA TCAAGCTGGC CTCCCAAGCG TATAAAGACA TTAATGCTGG CAAACTGATT
ATAAAAGAAG GTCATATTTA TAAGGCGTCG GAATACGGTC GATTAAAGAT GAACCCTTTC
CGAAAATTCA GCATTCTTGG AAAGCTGGCT ACAGCGGGGC TGTTCTTGGT CATTGTTGGT
TTCTTAGTCA GCGCCTTCCT AGCCAATTCA ACCTATGTTG AAACCGTTGC TGAAAACAGC
AAAGTTCGAA GCCAGCAAGT TAAGAAAGAC ATCAATAATT ATGTCCAAAG AATGGAAAGA
ACCAGCTTAA ATACCGCTTT GGGCTTAGCC TCAAACGCCG ACATCATTGC AGCGCTGGAA
AGTGGCTCCT ATGAAATGGC CAATACGGCC TTGCAAAAGG AATTAAACTT TATCAAAAAC
GTATCTGGGC AAGCGGTTCG TGCGCACATC CATGATGCAC AAGGACACTC ATTTGTTCGT
TCATGGCGTG ACAAACATGG CGATGATTTA AAGTCATTCC GTTATACCGT CAACCAGGTG
AGAGACAAAA AAACCTCGGT AACAGGGATT GAACTGGGCC GTGCAGGCGC CGCGATCCGA
AGTTTATCCC CGATTTTCAG TGACGATGGA AGTCAATTTT TAGGTTCCGT TGAAGTGGTC
TCCAGTATCA AGGCTCTGGT TAAGCACTTC AAAGAAGATG CCATCAATTA TGTTTCGCTT
TTCACACCCA ATGCGCTAGA CATTGCGATC AAAGCAAAAG ACAACCCTAA ATTTGGCAAC
TTGACGTTAG CCAGCACGAA GGATTTTGCG CCTGAAGCCA TCGAGAAATT GAAGCAAGTT
GATCTAAACC AATTGAAAAG CCAAGGGGTG TTAACAACGG CAACGGATTT CTTTGTGATG
ATGCCGATCA TTGATACCAA CCAAAGCTTG GTGGGCTATC ACATCTTCAT CGAAGATTTA
TCACAAATCA ACACACTCAA TAAATTGAGT TTGGAAGCCG CTATTTCGTC AGTTGCTAAA
GTCACCCTTT CCATGTTGAT TTTGATTATC ATTTTCTTAT TGATTATTCG AAACAGTGTC
ACGGTTCCTT TACGAAAAAT TGTCAAAGGC ATGAATCAGG CTACAGAAAC CGGCGACTTA
AGCACACGTG TTGACAACTC ACGTTATGAT GAAATGGGCG AACTGGCGAA AGCCTACAAC
GATCAAATGC AAGCCGCGCA AGTGTCACTC GGTGAAGCCG GTCGTATGTT AAAAGATATG
TCGGAAGGTC ATCTCAAAAC CCAAACGGTT ATCCCAATGG TGGGTGACTT CAATGTTATG
AAAACCAACT TGAACGAAGC GTCAAGAATG CTTCAAAAAA CGTTTGGCGA AGTTCGAGGC
ATTCTAAAAG AAATCCGTTT AGGAAACTTC AGTTATGAAT CAAACCACGA AACTCAAGGA
GATTTTAAAG AAGCCATGCA GGATGCCGAA GCGGCAATGG CCATCTTAAA AGGGGTTTTC
TATGAAGTGA ATGAGCTGAT GGCTCAAGTG GCTGAAGGCT TCTTTGGAAA ACGTATTACC
GCCGAAGCAG AAGGCGAAAT CAAAGAACTT AAAAATAACA TTAACGCCTC TTTGGATCAG
CTGGAAGCCG TTATTCAAGA AACCACTCAG GTAATGATTG CACAGGGTAC CGGGGACTTG
AAAAAACGTA TCGAGATGGA AACAAATGGT ACCTTGGCTG TTTTAAAAGC CGGAATCAAT
AATTCGGTCA CCAACATCGG AAGCTTGCTT TCACAGTCAA ACTATTCGAT TAAAAAGTTG
TCGGATGGCA CCATCAAAAT ATCGCAGGAT ATTTCAGACT TATCTGCTCG TACGCAACAA
CAGGCCGCTT CGTTAGAAGA AACCGCGGCC AGTATGGAAC AAATTACGTC CACCATCCAA
CAGACAGCTA ACAATGCCAG AGAGGCAAAC GAAGCCGCAA ATGAATCTTT AGTGGAAGCG
CAAGATGCAA ACCAAGTGGT TCAAAAAACC ATTACCTCAA TCAATGAAAT CAATGAAGCA
AGTACCAAGA TTTCTGAGAT CACCACCTTG ATTGACAGCA TTGCATTCCA AACCAATCTA
CTGGCGCTTA ACGCGGCCGT TGAAGCGGCA CGAGCAGGCG ATCACGGTCG AGGGTTTGCC
GTTGTGGCAG GCGAAGTCAG AAGCCTTGCC GGAAAGTCGG CGGAAGCGGC AAAAGACATT
CGACAACTGA TTGACAATAC CGTTGAAAAA GTTCATGAAG GCGCTAAACT TGCGGATGAA
TCCGGTAAAG CTCTTGAGTT AATCAATAGC TCTATCGCTA AAATTGGCAA TTACGTCAGT
GAAATTTCTC AAACAACAGC AGAACAGGCA AAAGGCGTAG AACAAGTCAA TATTGCCATC
AGCAGCATCG ACCAGGTCAC GCAACAAAAC TCGGCCTTGG TGGATGAAAC GGCCGAACGA
ACCACGGATA TGAGTAGACT GGCTGAAGAC GTCAACAATG TCATCAGCAC GTTTAAAATC
GACCTCAATC AAATTGGATT CAGCACTGCG ATGCAGACAG GCGAATTTAC ATTTGCCAAT
GCCAGACGCG CACACAGTCA ATGGAAAGGA CTGGTCACGG CCTATGTAGA GGGCGTTCAT
GTTGAGTTTG ATAAAGAAGC GGCAACCGAC CACCATAAGT GTGCTTTAGG ACAATGGCTC
TACGGACCGG AAGGACAGCA GCATGCCAAT AAGCCTGAAA TGCAGACGCT GGAAAAATGG
CATGCGGAAT TGCATGCGAC CATTAAACGC ATCTTAGCGG CTCATCAGGT CGATGATACT
GAAAGCATCA AAAAAGAATT CCGCAACTTG GACAAAGCAA GCGAGGAAGT GATTCACAGC
ATCACGCAAG TTGAGCAATC ATTGGCAAAT GATCGAACAC GTCATGCCGC TCAGCAACCG
CGAGCAATGA AATCAACTCC CGCGCCAAAA CTGACTCAGG AGAAACCTAA AACGACTCCT
TCTAAAAAAG AAGAAACGAC GTCTAAACAA AGTTTGGGAA CAACAGCCAA GCCAAGTCAA
ACAAACGCGA AGGTGGATAC AGATAAAGGA ATGCAAAAAC CGGCCCCATC ACAACCAAAG
GATACTTCTA CAGATGAATG GAGTGAGTTT TAA
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| Protein sequence | MTNPNRPIID EQVTIPEHYR IISRTDPRGT ILEANSEFIE ISGYAADEIL GQPHNILRHP
DVPKAVFKDF WETLQAGKSW TQIVKNRTKD GRNYWVKANA APIFESNKIT GYISVRTPAT
EEQIKLASQA YKDINAGKLI IKEGHIYKAS EYGRLKMNPF RKFSILGKLA TAGLFLVIVG
FLVSAFLANS TYVETVAENS KVRSQQVKKD INNYVQRMER TSLNTALGLA SNADIIAALE
SGSYEMANTA LQKELNFIKN VSGQAVRAHI HDAQGHSFVR SWRDKHGDDL KSFRYTVNQV
RDKKTSVTGI ELGRAGAAIR SLSPIFSDDG SQFLGSVEVV SSIKALVKHF KEDAINYVSL
FTPNALDIAI KAKDNPKFGN LTLASTKDFA PEAIEKLKQV DLNQLKSQGV LTTATDFFVM
MPIIDTNQSL VGYHIFIEDL SQINTLNKLS LEAAISSVAK VTLSMLILII IFLLIIRNSV
TVPLRKIVKG MNQATETGDL STRVDNSRYD EMGELAKAYN DQMQAAQVSL GEAGRMLKDM
SEGHLKTQTV IPMVGDFNVM KTNLNEASRM LQKTFGEVRG ILKEIRLGNF SYESNHETQG
DFKEAMQDAE AAMAILKGVF YEVNELMAQV AEGFFGKRIT AEAEGEIKEL KNNINASLDQ
LEAVIQETTQ VMIAQGTGDL KKRIEMETNG TLAVLKAGIN NSVTNIGSLL SQSNYSIKKL
SDGTIKISQD ISDLSARTQQ QAASLEETAA SMEQITSTIQ QTANNAREAN EAANESLVEA
QDANQVVQKT ITSINEINEA STKISEITTL IDSIAFQTNL LALNAAVEAA RAGDHGRGFA
VVAGEVRSLA GKSAEAAKDI RQLIDNTVEK VHEGAKLADE SGKALELINS SIAKIGNYVS
EISQTTAEQA KGVEQVNIAI SSIDQVTQQN SALVDETAER TTDMSRLAED VNNVISTFKI
DLNQIGFSTA MQTGEFTFAN ARRAHSQWKG LVTAYVEGVH VEFDKEAATD HHKCALGQWL
YGPEGQQHAN KPEMQTLEKW HAELHATIKR ILAAHQVDDT ESIKKEFRNL DKASEEVIHS
ITQVEQSLAN DRTRHAAQQP RAMKSTPAPK LTQEKPKTTP SKKEETTSKQ SLGTTAKPSQ
TNAKVDTDKG MQKPAPSQPK DTSTDEWSEF
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