Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1870 |
Symbol | |
ID | 3761083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2045747 |
End bp | 2046706 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637786613 |
Product | permease |
Protein accession | YP_392134 |
Protein GI | 78486209 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.788351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAT TCATCGGAAA TCAGCTGGCC TATGAGGTCT TGAAGCTCGA CCCAACAAGT GCTTTGGGCG CGGCGATGCA GTTTTTTATC ATGGATACGC TGAAAATATT CGTGATGCTG GTGGTGATTA TCTACGTTAT GGGGTTGCTG CGGGCGTTTG TCTCGACCGA GAAAGTTCGA ACAATTATTG CCGGAAAGCC AAAGTGGATG GGGCGTTCTT TGGCGATTTT ATTAGGCGGT GTGACGCCTT TTTGTTCTTG TTCTTCGGTG CCGTTATTCA TTGGCTTTGT GGAAGCGCGT ATTCCATTAG GGATCACCTT TGCTTTTCTG ATCGCCAGCC CGATGATTAA TGAAGTGGCG GTGGTGCTTT TGATTGGTAT TTTAGGTTGG CAAGTGGCTT TGCTCTATGT GTTGGCGGGT GTGTTTGTGG CGTATGTTGG TTCAATAATC ATGGAAATGT TTAAGCCGGA ACGTTGGGTA GAAGCCTATG TTTGGGATAT TAAGGTGCGC CAAAAACAAG AACAACAAGC GTATGCAGGT GGGTTGAAAG AGCGTCATGG TTTTGCGTGG AATGAAATTA AAGTCATTGT GCAGCGTATT TGGTTGTGGG TGATTGTGGG TATTGGAATG GGGGCGGCCT TTCATGGCTA TGTGCCTCAG GCGTGGATTG AGTCGACCTT GGCGGATGCG CAGAATTGGT GGAGTGTGCC CGCGGCGGTC TTAGTGGGGG TGCCTTTATA TTCCAATGCC ACGGGGGTGA TTCCGATTGT GGAAGCGATG CTGATGAAAG GCGTTCCAAT CGGTACCAGC TTGGCCTTGA TGATGAGCAT TGCCGCGTTA TCGCTGCCGG AATTATTGAT CTTGCGTAAA GTCATTCGTT GGCCGGCGCT GGCATTATTT GTTTGTGTGT TGGCGCTGGC GTTTACGGCG GTAGGGTATT TGTTTAACGC TATTTTTTAA
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Protein sequence | MFEFIGNQLA YEVLKLDPTS ALGAAMQFFI MDTLKIFVML VVIIYVMGLL RAFVSTEKVR TIIAGKPKWM GRSLAILLGG VTPFCSCSSV PLFIGFVEAR IPLGITFAFL IASPMINEVA VVLLIGILGW QVALLYVLAG VFVAYVGSII MEMFKPERWV EAYVWDIKVR QKQEQQAYAG GLKERHGFAW NEIKVIVQRI WLWVIVGIGM GAAFHGYVPQ AWIESTLADA QNWWSVPAAV LVGVPLYSNA TGVIPIVEAM LMKGVPIGTS LALMMSIAAL SLPELLILRK VIRWPALALF VCVLALAFTA VGYLFNAIF
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