Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1859 |
Symbol | |
ID | 3761072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 2034966 |
End bp | 2035781 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637786602 |
Product | integrase catalytic subunit |
Protein accession | YP_392124 |
Protein GI | 78486199 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACCGCA GTAGCTTTAA AGCCTGGCGA AGCCGCCCAA AGCGCATCAA GCCAAAGTTG GTAAAAGAGT TGGCGATGGT GCGCCGAATT CATGCTGAAA GCAACGGTTC AGCCGGTGCG CGAACGATAG CATTAGTGGC CACAGAGCGT GCTATTCCTC TTAGTCGTTA TCGTGCTCAA AGATTGATGG GAAAACTTGG CTTAGTCAGT TGCCAGTTAC CTAAACATAG CTACAAAAAA GCCACACAAG AACATATTTG TATTCCAAAC AGTCTTGATC GCCAGTTCGA CCCGGCGCGC CCGAATCAAG TCTGGGTCGG GGATGTAACC TATATCTGGG CAGGTAACCG CTGGTCGTAT TTAGCGGTGG TATTGGATTT ATATGCCAGA AAAGTAATCG GTTGGGCGAT GTCTTATTCA CCCGATAGTG AGTTGACTGC AAAAGCCTTA ACCATGGCGT TTGAATTACG AGGCAAGCCA GACGGCTTGT TATTCCACTC AGATCAAGGC AGTCACTACA CGAGCACTAA GTACCGCCAA CTATTATGGC GTTACCAGAT AAAACAAAGC CTCAGTCGTC GCGGTAATTG CTGGGATAAC AGCCCGATGG AACGCTTCTT TAGAAGCTTG AAAACCGAAT GGGTGCCGAC GTTGGGTTAC AAAAGTTTAG CTGAAGCACG CAATCATGTA ACCAGTTACA TAATCGGCTA TTACAGCCAA GTGAGGCCTC ATGCATTTAA TGATGGCAAA ACGCCAAACA AAGCTGAGGA AATTTATTGG GCAAATTGCT CTAAATCGGT GGCCAAAAAA ACTTGA
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Protein sequence | MYRSSFKAWR SRPKRIKPKL VKELAMVRRI HAESNGSAGA RTIALVATER AIPLSRYRAQ RLMGKLGLVS CQLPKHSYKK ATQEHICIPN SLDRQFDPAR PNQVWVGDVT YIWAGNRWSY LAVVLDLYAR KVIGWAMSYS PDSELTAKAL TMAFELRGKP DGLLFHSDQG SHYTSTKYRQ LLWRYQIKQS LSRRGNCWDN SPMERFFRSL KTEWVPTLGY KSLAEARNHV TSYIIGYYSQ VRPHAFNDGK TPNKAEEIYW ANCSKSVAKK T
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